Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 AC109810.1-201ENST00000534066 224 ntBASIC3.22□□□□□ -1.89
TNFRSF1AP19438 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF1AP19438 AC136601.2-201ENST00000604356 474 ntBASIC3.22□□□□□ -1.89
TNFRSF1AP19438 AL137849.1-201ENST00000604767 169 ntBASIC3.22□□□□□ -1.89
TNFRSF1AP19438 MIR3914-2-201ENST00000637339 95 ntBASIC3.22□□□□□ -1.89
TNFRSF1AP19438 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF1AP19438 AC241585.2-209ENST00000638217 143 ntBASIC3.22□□□□□ -1.89
TNFRSF1AP19438 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TNFRSF1AP19438 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
TNFRSF1AP19438 MAPK10-362ENST00000641864 4484 ntBASIC3.22□□□□□ -1.89
TNFRSF1AP19438 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
TNFRSF1AP19438 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
TNFRSF1AP19438 AC103988.1-201ENST00000566382 2177 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AL161912.2-201ENST00000565707 3007 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 RNY1P11-201ENST00000363759 113 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 RNU6-166P-201ENST00000384371 107 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 RNU6-763P-201ENST00000390865 106 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 RNU1-101P-201ENST00000391171 127 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 SNORA40C-201ENST00000391285 128 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 RPL21P17-201ENST00000397467 475 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 RN7SKP284-201ENST00000411002 343 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 RNU6-1199P-201ENST00000411249 104 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 CYCSP19-201ENST00000411715 316 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC006461.1-201ENST00000412637 326 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC138623.1-201ENST00000418060 216 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 EIF1AXP1-201ENST00000419267 435 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 U8.19-201ENST00000459095 133 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC091874.1-201ENST00000511402 339 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 SNORA31.19-201ENST00000517079 126 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC021269.2-201ENST00000532318 330 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 MIR5187-201ENST00000583479 76 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 snoZ196.1-201ENST00000625269 89 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFRSF1AP19438 FAM35BP-202ENST00000497389 3337 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 AC068700.1-201ENST00000565862 3754 ntBASIC3.21□□□□□ -1.9
TNFRSF1AP19438 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TNFRSF1AP19438 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFRSF1AP19438 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AC022336.2-201ENST00000568966 2538 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 SNORA29-201ENST00000384183 140 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 RNA5SP424-201ENST00000390988 115 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFRSF1AP19438 snoU109.2-201ENST00000459316 135 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AC084357.1-201ENST00000473404 255 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AC006445.2-201ENST00000510061 472 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 RNU6-155P-201ENST00000516347 100 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 RNU6-58P-201ENST00000517143 103 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AC074050.1-201ENST00000563247 211 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AC087499.8-201ENST00000578406 226 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 AL034408.1-202ENST00000636088 415 ntBASIC3.2□□□□□ -1.9
TNFRSF1AP19438 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TNFRSF1AP19438 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.2□□□□□ -1.9
TNFRSF1AP19438 MAPK10-253ENST00000641010 4072 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 MIR423-201ENST00000362201 94 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 SNORA25.7-201ENST00000364375 127 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU4-10P-201ENST00000364383 140 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 SNORD73B-201ENST00000364394 72 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU6-1180P-201ENST00000364935 107 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU6-407P-201ENST00000365280 104 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU6-217P-201ENST00000384164 104 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 Y_RNA.495-201ENST00000384435 112 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 SNORA40.5-201ENST00000391061 128 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU6-1248P-201ENST00000391096 64 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 MIR888-201ENST00000401186 77 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNA5SP44-201ENST00000410446 133 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AIMP1P2-201ENST00000425294 312 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AC007560.1-201ENST00000426912 237 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AC010095.1-201ENST00000443543 144 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU6-625P-201ENST00000459412 107 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AL133162.1-201ENST00000463228 453 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RNU6-772P-201ENST00000516042 105 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RN7SKP209-201ENST00000516888 304 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 NDUFA5P6-201ENST00000542110 379 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 NACAP3-201ENST00000552100 481 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AC024153.1-201ENST00000603103 365 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AC108081.1-201ENST00000604358 221 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AC091932.3-201ENST00000624223 323 ntBASIC3.19□□□□□ -1.9
TNFRSF1AP19438 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF1AP19438 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 257.8 ms