Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.74□□□□□ -2.13
SDC1P18827 AC090617.10-201ENST00000624308 134 ntBASIC1.74□□□□□ -2.13
SDC1P18827 MIR3688-2-201ENST00000636963 87 ntBASIC1.74□□□□□ -2.13
SDC1P18827 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SDC1P18827 SNORD113-7-201ENST00000363762 77 ntBASIC1.73□□□□□ -2.13
SDC1P18827 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SDC1P18827 RNU6-378P-201ENST00000384324 107 ntBASIC1.73□□□□□ -2.13
SDC1P18827 Y_RNA.530-201ENST00000384587 101 ntBASIC1.73□□□□□ -2.13
SDC1P18827 MIR1283-2-201ENST00000408621 87 ntBASIC1.73□□□□□ -2.13
SDC1P18827 RNA5SP450-201ENST00000411206 102 ntBASIC1.73□□□□□ -2.13
SDC1P18827 SRIP3-201ENST00000413200 219 ntBASIC1.73□□□□□ -2.13
SDC1P18827 VN1R36P-201ENST00000414936 291 ntBASIC1.73□□□□□ -2.13
SDC1P18827 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.73□□□□□ -2.13
SDC1P18827 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.73□□□□□ -2.13
SDC1P18827 RNU7-187P-201ENST00000458985 68 ntBASIC1.73□□□□□ -2.13
SDC1P18827 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
SDC1P18827 MTCO1P29-201ENST00000496868 288 ntBASIC1.73□□□□□ -2.13
SDC1P18827 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.73□□□□□ -2.13
SDC1P18827 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.73□□□□□ -2.13
SDC1P18827 AC005741.1-201ENST00000511094 432 ntBASIC1.73□□□□□ -2.13
SDC1P18827 RNU2-44P-201ENST00000516795 194 ntBASIC1.73□□□□□ -2.13
SDC1P18827 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.73□□□□□ -2.13
SDC1P18827 AC026371.1-201ENST00000551867 419 ntBASIC1.73□□□□□ -2.13
SDC1P18827 AC091544.4-201ENST00000555268 342 ntBASIC1.73□□□□□ -2.13
SDC1P18827 AC109446.1-201ENST00000566172 220 ntBASIC1.73□□□□□ -2.13
SDC1P18827 CYP4A27P-201ENST00000567218 190 ntBASIC1.73□□□□□ -2.13
SDC1P18827 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
SDC1P18827 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.73□□□□□ -2.13
SDC1P18827 AP000654.2-201ENST00000605633 586 ntBASIC1.73□□□□□ -2.13
SDC1P18827 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.73□□□□□ -2.13
SDC1P18827 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
SDC1P18827 Y_RNA.123-201ENST00000363338 102 ntBASIC1.72□□□□□ -2.13
SDC1P18827 RNU6-1164P-201ENST00000364428 107 ntBASIC1.72□□□□□ -2.13
SDC1P18827 Y_RNA.295-201ENST00000364918 102 ntBASIC1.72□□□□□ -2.13
SDC1P18827 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SDC1P18827 RNU6-128P-201ENST00000383976 107 ntBASIC1.72□□□□□ -2.13
SDC1P18827 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.72□□□□□ -2.13
SDC1P18827 BX510359.4-201ENST00000423750 193 ntBASIC1.72□□□□□ -2.13
SDC1P18827 AC096920.1-201ENST00000423991 241 ntBASIC1.72□□□□□ -2.13
SDC1P18827 AL590632.1-201ENST00000424289 371 ntBASIC1.72□□□□□ -2.13
SDC1P18827 MTND1P34-201ENST00000438556 671 ntBASIC1.72□□□□□ -2.13
SDC1P18827 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.72□□□□□ -2.13
SDC1P18827 RPS29P25-201ENST00000481709 171 ntBASIC1.72□□□□□ -2.13
SDC1P18827 AC107393.1-201ENST00000512403 346 ntBASIC1.72□□□□□ -2.13
SDC1P18827 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.72□□□□□ -2.13
SDC1P18827 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.72□□□□□ -2.13
SDC1P18827 MIR4648-201ENST00000580107 72 ntBASIC1.72□□□□□ -2.13
SDC1P18827 AL109918.3-201ENST00000603072 338 ntBASIC1.72□□□□□ -2.13
SDC1P18827 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SDC1P18827 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.72□□□□□ -2.13
SDC1P18827 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-1159P-201ENST00000362933 107 ntBASIC1.71□□□□□ -2.14
SDC1P18827 U3.9-201ENST00000363823 204 ntBASIC1.71□□□□□ -2.14
SDC1P18827 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-234P-201ENST00000365229 104 ntBASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-877P-201ENST00000383868 107 ntBASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-26P-201ENST00000383985 107 ntBASIC1.71□□□□□ -2.14
SDC1P18827 MIR9-3-201ENST00000385084 90 ntBASIC1.71□□□□□ -2.14
SDC1P18827 MIR208B-201ENST00000401172 77 ntBASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-1148P-201ENST00000410992 104 ntBASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-373P-201ENST00000411247 98 ntBASIC1.71□□□□□ -2.14
SDC1P18827 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SDC1P18827 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.71□□□□□ -2.14
SDC1P18827 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AC012306.1-201ENST00000423267 114 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AL513185.2-201ENST00000425543 193 ntBASIC1.71□□□□□ -2.14
SDC1P18827 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.71□□□□□ -2.14
SDC1P18827 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.71□□□□□ -2.14
SDC1P18827 UBE2V1P8-201ENST00000437166 265 ntBASIC1.71□□□□□ -2.14
SDC1P18827 snoU13.6-201ENST00000458785 104 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AC007547.1-201ENST00000462177 490 ntBASIC1.71□□□□□ -2.14
SDC1P18827 TRBVA-201ENST00000498804 316 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-718P-201ENST00000516166 105 ntBASIC1.71□□□□□ -2.14
SDC1P18827 RNU6-567P-201ENST00000516746 107 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.71□□□□□ -2.14
SDC1P18827 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.71□□□□□ -2.14
SDC1P18827 EIF4A1P12-201ENST00000551910 141 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AC110588.1-201ENST00000559699 137 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.71□□□□□ -2.14
SDC1P18827 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.71□□□□□ -2.14
SDC1P18827 AC146944.4-201ENST00000602697 718 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AL096840.1-201ENST00000603287 93 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AC009994.1-201ENST00000606889 253 ntBASIC1.71□□□□□ -2.14
SDC1P18827 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.71□□□□□ -2.14
SDC1P18827 AC005520.5-201ENST00000613926 164 ntBASIC1.71□□□□□ -2.14
SDC1P18827 AL138726.1-201ENST00000614873 333 ntBASIC1.71□□□□□ -2.14
SDC1P18827 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SDC1P18827 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
SDC1P18827 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
SDC1P18827 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDC1P18827 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
SDC1P18827 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SDC1P18827 Y_RNA.6-201ENST00000362350 114 ntBASIC1.7□□□□□ -2.14
SDC1P18827 RNA5SP276-201ENST00000362580 94 ntBASIC1.7□□□□□ -2.14
SDC1P18827 Y_RNA.99-201ENST00000363138 105 ntBASIC1.7□□□□□ -2.14
SDC1P18827 Y_RNA.100-201ENST00000363141 102 ntBASIC1.7□□□□□ -2.14
SDC1P18827 Y_RNA.135-201ENST00000363439 95 ntBASIC1.7□□□□□ -2.14
SDC1P18827 Y_RNA.414-201ENST00000384011 101 ntBASIC1.7□□□□□ -2.14
SDC1P18827 SNORA29-201ENST00000384183 140 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms