Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.08□□□□□ -2.08
PDGFRAP16234 UBL5P3-201ENST00000475112 231 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 MTND1P5-201ENST00000517906 940 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 MTND1P35-201ENST00000526739 508 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 EIF4A1P12-201ENST00000551910 141 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.08□□□□□ -2.08
PDGFRAP16234 AC109446.1-201ENST00000566172 220 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 CPDP1-201ENST00000579660 283 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 AC024614.3-201ENST00000637860 256 ntBASIC2.08□□□□□ -2.08
PDGFRAP16234 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
PDGFRAP16234 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.07□□□□□ -2.08
PDGFRAP16234 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDGFRAP16234 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDGFRAP16234 SNORD113-7-201ENST00000363762 77 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 RNU6-234P-201ENST00000365229 104 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDGFRAP16234 SNORA36A-201ENST00000384221 132 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 Y_RNA.530-201ENST00000384587 101 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 AL357139.1-201ENST00000407792 426 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 MIR1283-2-201ENST00000408621 87 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 AL030996.1-201ENST00000411430 235 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.07□□□□□ -2.08
PDGFRAP16234 MTND3P9-201ENST00000429526 346 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 AC007547.1-201ENST00000462177 490 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 MTCO1P29-201ENST00000496868 288 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 TRBVA-201ENST00000498804 316 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.07□□□□□ -2.08
PDGFRAP16234 MIR449C-201ENST00000516047 92 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.07□□□□□ -2.08
PDGFRAP16234 AC026371.1-201ENST00000551867 419 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.07□□□□□ -2.08
PDGFRAP16234 AL109918.3-201ENST00000603072 338 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 AC098657.3-201ENST00000620434 263 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
PDGFRAP16234 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PDGFRAP16234 SNORD115-3-201ENST00000363100 82 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 RNU6-1164P-201ENST00000364428 107 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 Y_RNA.450-201ENST00000384198 113 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 RNU6-378P-201ENST00000384324 107 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 RNU6-332P-201ENST00000391193 108 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 MIR1289-2-201ENST00000408360 111 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 RNU6-325P-201ENST00000411132 105 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 RNU6-373P-201ENST00000411247 98 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.06□□□□□ -2.08
PDGFRAP16234 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.06□□□□□ -2.08
PDGFRAP16234 AC096920.1-201ENST00000423991 241 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 HMGN2P3-201ENST00000433603 273 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AL645568.3-201ENST00000433683 316 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 HMGN2P5-201ENST00000436882 273 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.06□□□□□ -2.08
PDGFRAP16234 MTND1P34-201ENST00000438556 671 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.06□□□□□ -2.08
PDGFRAP16234 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.06□□□□□ -2.08
PDGFRAP16234 AC021146.2-201ENST00000504736 556 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 RNU6-991P-201ENST00000516168 107 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AL158827.2-201ENST00000602494 330 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 CTHRC1P1-201ENST00000605383 469 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AC009994.1-201ENST00000606889 253 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 RMST_3.1-201ENST00000611651 109 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.06□□□□□ -2.08
PDGFRAP16234 MIR6715A-201ENST00000615929 79 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AL691447.3-201ENST00000635020 330 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 AC092881.1-201ENST00000638218 2733 ntBASIC2.06□□□□□ -2.08
PDGFRAP16234 Y_RNA.100-201ENST00000363141 102 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 RNA5SP138-201ENST00000365098 114 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 RNU6-1215P-201ENST00000384441 102 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PDGFRAP16234 RNA5SP465-201ENST00000391195 109 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 VN1R36P-201ENST00000414936 291 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 BX510359.4-201ENST00000423750 193 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.05□□□□□ -2.08
PDGFRAP16234 MTND2P29-201ENST00000438595 412 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.05□□□□□ -2.08
PDGFRAP16234 HMGN2P18-201ENST00000450680 270 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 RPL23AP3-201ENST00000453844 468 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 FAM206BP-201ENST00000510179 541 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 AC104984.5-201ENST00000586878 94 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.05□□□□□ -2.08
PDGFRAP16234 RPL17P51-201ENST00000605218 238 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 MIR8076-201ENST00000611401 83 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
PDGFRAP16234 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PDGFRAP16234 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PDGFRAP16234 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PDGFRAP16234 AC009487.4-201ENST00000624969 3585 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PDGFRAP16234 RNU1-58P-201ENST00000362413 163 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 Y_RNA.332-201ENST00000365271 113 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 AL356432.1-201ENST00000405809 419 ntBASIC2.04□□□□□ -2.08
PDGFRAP16234 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.04□□□□□ -2.08
PDGFRAP16234 ZNF885P-201ENST00000420174 1098 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms