Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP1P11387 FO082796.1-201ENST00000523795 183 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP1P11387 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP1P11387 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AP000907.4-201ENST00000604143 237 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC104458.1-201ENST00000608243 463 ntBASIC1.82□□□□□ -2.12
TOP1P11387 DISC2.1-201ENST00000612827 205 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AL132822.1-201ENST00000617063 513 ntBASIC1.82□□□□□ -2.12
TOP1P11387 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.82□□□□□ -2.12
TOP1P11387 RNU6-60P-201ENST00000364792 103 ntBASIC1.81□□□□□ -2.12
TOP1P11387 Y_RNA.324-201ENST00000365165 102 ntBASIC1.81□□□□□ -2.12
TOP1P11387 RNU4-66P-201ENST00000365199 138 ntBASIC1.81□□□□□ -2.12
TOP1P11387 Y_RNA.453-201ENST00000384223 109 ntBASIC1.81□□□□□ -2.12
TOP1P11387 SNORD14D-201ENST00000384390 87 ntBASIC1.81□□□□□ -2.12
TOP1P11387 MIR517C-201ENST00000385103 95 ntBASIC1.81□□□□□ -2.12
TOP1P11387 MIR1262-201ENST00000408276 93 ntBASIC1.81□□□□□ -2.12
TOP1P11387 RNU4-62P-201ENST00000410125 130 ntBASIC1.81□□□□□ -2.12
TOP1P11387 Y_RNA.615-201ENST00000410769 117 ntBASIC1.81□□□□□ -2.12
TOP1P11387 SRIP3-201ENST00000413200 219 ntBASIC1.81□□□□□ -2.12
TOP1P11387 CALM1P1-201ENST00000442082 433 ntBASIC1.81□□□□□ -2.12
TOP1P11387 PRELID3BP1-201ENST00000457142 540 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.81□□□□□ -2.12
TOP1P11387 Y_RNA.638-201ENST00000459374 113 ntBASIC1.81□□□□□ -2.12
TOP1P11387 HMGB1P30-201ENST00000492455 606 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.81□□□□□ -2.12
TOP1P11387 PTP4A1P4-201ENST00000512479 322 ntBASIC1.81□□□□□ -2.12
TOP1P11387 SNORA44.1-201ENST00000517031 108 ntBASIC1.81□□□□□ -2.12
TOP1P11387 CENPUP1-201ENST00000526649 1202 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AC022616.8-201ENST00000533569 253 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.81□□□□□ -2.12
TOP1P11387 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.81□□□□□ -2.12
TOP1P11387 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.81□□□□□ -2.12
TOP1P11387 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AC123912.5-201ENST00000605470 343 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AC002044.1-201ENST00000606707 158 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AC002553.4-201ENST00000616896 331 ntBASIC1.81□□□□□ -2.12
TOP1P11387 AC026585.1-201ENST00000619582 524 ntBASIC1.81□□□□□ -2.12
TOP1P11387 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.81□□□□□ -2.12
TOP1P11387 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TOP1P11387 OR4G1P-203ENST00000641984 1631 ntBASIC1.8□□□□□ -2.12
TOP1P11387 RNU6-655P-201ENST00000362858 107 ntBASIC1.8□□□□□ -2.12
TOP1P11387 RNU6-82P-201ENST00000363970 107 ntBASIC1.8□□□□□ -2.12
TOP1P11387 RNU1-42P-201ENST00000364033 160 ntBASIC1.8□□□□□ -2.12
TOP1P11387 Y_RNA.231-201ENST00000364358 102 ntBASIC1.8□□□□□ -2.12
TOP1P11387 Y_RNA.295-201ENST00000364918 102 ntBASIC1.8□□□□□ -2.12
TOP1P11387 RNU6-1274P-201ENST00000384557 107 ntBASIC1.8□□□□□ -2.12
TOP1P11387 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
TOP1P11387 RNU6-332P-201ENST00000391193 108 ntBASIC1.8□□□□□ -2.12
TOP1P11387 MIR1323-201ENST00000408090 73 ntBASIC1.8□□□□□ -2.12
TOP1P11387 MIR1277-201ENST00000408536 78 ntBASIC1.8□□□□□ -2.12
TOP1P11387 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.8□□□□□ -2.12
TOP1P11387 SNRPEP10-201ENST00000420249 274 ntBASIC1.8□□□□□ -2.12
TOP1P11387 AL121601.2-201ENST00000438019 707 ntBASIC1.8□□□□□ -2.12
TOP1P11387 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.8□□□□□ -2.12
TOP1P11387 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.8□□□□□ -2.12
TOP1P11387 RNA5SP57-201ENST00000459463 123 ntBASIC1.8□□□□□ -2.12
TOP1P11387 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
TOP1P11387 AC091885.1-201ENST00000506658 268 ntBASIC1.8□□□□□ -2.12
TOP1P11387 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.8□□□□□ -2.12
TOP1P11387 Y_RNA.687-201ENST00000516558 91 ntBASIC1.8□□□□□ -2.12
TOP1P11387 RN7SKP256-201ENST00000517201 314 ntBASIC1.8□□□□□ -2.12
TOP1P11387 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.8□□□□□ -2.12
TOP1P11387 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.8□□□□□ -2.12
TOP1P11387 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.8□□□□□ -2.12
TOP1P11387 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
TOP1P11387 VN1R80P-201ENST00000597126 338 ntBASIC1.8□□□□□ -2.12
TOP1P11387 AC092807.2-201ENST00000609367 243 ntBASIC1.8□□□□□ -2.12
TOP1P11387 AC103705.1-201ENST00000619013 241 ntBASIC1.8□□□□□ -2.12
TOP1P11387 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.8□□□□□ -2.12
TOP1P11387 Z69720.2-201ENST00000624755 279 ntBASIC1.8□□□□□ -2.12
TOP1P11387 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.8□□□□□ -2.12
TOP1P11387 AC121333.1-201ENST00000567488 2709 ntBASIC1.79□□□□□ -2.12
TOP1P11387 Y_RNA.248-201ENST00000364501 109 ntBASIC1.79□□□□□ -2.12
TOP1P11387 RNU4-42P-201ENST00000364738 142 ntBASIC1.79□□□□□ -2.12
TOP1P11387 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
TOP1P11387 CBX3P9-201ENST00000402326 552 ntBASIC1.79□□□□□ -2.12
TOP1P11387 RNU6-1148P-201ENST00000410992 104 ntBASIC1.79□□□□□ -2.12
TOP1P11387 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.79□□□□□ -2.12
TOP1P11387 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.79□□□□□ -2.12
TOP1P11387 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.79□□□□□ -2.12
TOP1P11387 ERLEC1P1-201ENST00000433806 578 ntBASIC1.79□□□□□ -2.12
TOP1P11387 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.79□□□□□ -2.12
TOP1P11387 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.79□□□□□ -2.12
TOP1P11387 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.79□□□□□ -2.12
TOP1P11387 RNU6-1208P-201ENST00000459588 107 ntBASIC1.79□□□□□ -2.12
TOP1P11387 HMGN2P26-201ENST00000463169 339 ntBASIC1.79□□□□□ -2.12
TOP1P11387 SNORA14.1-201ENST00000516113 141 ntBASIC1.79□□□□□ -2.12
TOP1P11387 AP004607.1-201ENST00000524456 203 ntBASIC1.79□□□□□ -2.12
TOP1P11387 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.79□□□□□ -2.12
TOP1P11387 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.79□□□□□ -2.12
TOP1P11387 CYP2C61P-201ENST00000604072 290 ntBASIC1.79□□□□□ -2.12
TOP1P11387 AL670379.2-201ENST00000604983 252 ntBASIC1.79□□□□□ -2.12
TOP1P11387 BNIP3P10-201ENST00000605360 577 ntBASIC1.79□□□□□ -2.12
TOP1P11387 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.79□□□□□ -2.12
TOP1P11387 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.79□□□□□ -2.12
TOP1P11387 AC090517.3-201ENST00000625170 141 ntBASIC1.79□□□□□ -2.12
TOP1P11387 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TOP1P11387 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.12
TOP1P11387 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms