Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNU6-1026P-201ENST00000384465 108 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RPS29P13-201ENST00000402041 169 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 COX6CP10-201ENST00000416832 224 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC060773.1-201ENST00000421698 310 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC013410.2-201ENST00000422627 201 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AL133396.1-201ENST00000432048 687 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 SNAP23P1-201ENST00000433229 246 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 GAPDHP17-201ENST00000449858 1001 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RPS26P45-201ENST00000471748 340 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC104136.1-201ENST00000512969 394 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RNA5SP384-201ENST00000516615 116 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RNU6-165P-201ENST00000517170 99 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC109479.2-201ENST00000517842 174 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 CYCSP23-201ENST00000519781 313 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC022616.3-201ENST00000523940 148 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 HSPE1P4-201ENST00000550617 308 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.71□□□□□ -2.3
HLA-DQB2P05538 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.71□□□□□ -2.3
HLA-DQB2P05538 MIR4509-3-201ENST00000578671 94 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 MIR4742-201ENST00000581069 85 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 MIR4509-2-201ENST00000583920 94 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC064872.1-201ENST00000604823 1072 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AL356157.2-201ENST00000605122 111 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RPL17P51-201ENST00000605218 238 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AL158050.2-201ENST00000605336 568 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 MIR4509-1-201ENST00000618224 94 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 AC126177.8-201ENST00000618339 1015 ntBASIC0.71□□□□□ -2.3
HLA-DQB2P05538 RNU6-428P-201ENST00000362942 107 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 RNU5F-6P-201ENST00000362979 116 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 RNU6-534P-201ENST00000364877 106 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 SNORD115-7-201ENST00000365306 82 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 RNU6-877P-201ENST00000383868 107 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 RNU6-116P-201ENST00000384042 109 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MRPL42P2-201ENST00000403169 426 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.7□□□□□ -2.3
HLA-DQB2P05538 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-DQB2P05538 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.7□□□□□ -2.3
HLA-DQB2P05538 AC067942.3-201ENST00000512025 362 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 AC011406.1-201ENST00000512440 370 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.7□□□□□ -2.3
HLA-DQB2P05538 RNU6-1220P-201ENST00000517126 108 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MIR4709-201ENST00000577272 72 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MIR4452-201ENST00000583004 71 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MIR4999-201ENST00000585029 91 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 AP000811.1-201ENST00000603803 651 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 AC008945.2-201ENST00000606056 604 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.7□□□□□ -2.3
HLA-DQB2P05538 AL445984.1-201ENST00000637834 659 ntBASIC0.7□□□□□ -2.3
HLA-DQB2P05538 MIR515-2-201ENST00000384883 83 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 MIR515-1-201ENST00000384884 83 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 POLR2J4-204ENST00000418424 324 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 GTF2IP13-201ENST00000438487 386 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 RNU7-34P-201ENST00000459394 64 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC116562.3-201ENST00000506136 177 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.69□□□□□ -2.3
HLA-DQB2P05538 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.69□□□□□ -2.3
HLA-DQB2P05538 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC112206.4-201ENST00000515142 405 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 SCARNA24.1-201ENST00000516465 137 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC068587.5-201ENST00000528506 175 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AL391646.1-201ENST00000603860 190 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AL031281.1-201ENST00000604049 488 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 Z98751.3-201ENST00000604447 521 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC009994.1-201ENST00000606889 253 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC005520.5-201ENST00000613926 164 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 AC138649.3-201ENST00000622154 254 ntBASIC0.69□□□□□ -2.3
HLA-DQB2P05538 RNU6-1303P-201ENST00000364841 107 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 AL355143.1-201ENST00000407101 841 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 AL117339.3-201ENST00000418733 162 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 AC091435.1-201ENST00000505442 584 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.68□□□□□ -2.3
HLA-DQB2P05538 CYP4A27P-201ENST00000567218 190 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 AC008088.1-201ENST00000580993 280 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.68□□□□□ -2.3
HLA-DQB2P05538 MIR338-201ENST00000636369 67 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 AC099654.13-201ENST00000639774 207 ntBASIC0.68□□□□□ -2.3
HLA-DQB2P05538 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
HLA-DQB2P05538 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
HLA-DQB2P05538 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
HLA-DQB2P05538 BX322639.1-202ENST00000423987 2213 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 RNU6-1123P-201ENST00000362347 106 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 RNU6-552P-201ENST00000362869 119 ntBASIC0.67□□□□□ -2.3
HLA-DQB2P05538 Y_RNA.132-201ENST00000363421 102 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms