Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL135790.2-201ENST00000437701 267 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 HMGN2P7-201ENST00000456186 273 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 AC006445.1-201ENST00000491925 405 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.87□□□□□ -1.79
PDGFAP04085 MIR5685-201ENST00000579080 79 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 AL606490.9-201ENST00000603331 271 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 AC012531.5-201ENST00000611375 151 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 AC091905.2-201ENST00000623143 306 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PDGFAP04085 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFAP04085 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFAP04085 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFAP04085 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFAP04085 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.86□□□□□ -1.79
PDGFAP04085 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFAP04085 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFAP04085 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFAP04085 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFAP04085 RNU6-103P-201ENST00000363686 107 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 Y_RNA.293-201ENST00000364908 93 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 Y_RNA.341-201ENST00000365341 102 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 Y_RNA.400-201ENST00000383963 111 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 Y_RNA.456-201ENST00000384232 111 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 MIR548B-201ENST00000385247 97 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.86□□□□□ -1.79
PDGFAP04085 AL355497.1-201ENST00000406262 551 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 AC093578.1-201ENST00000415219 368 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 AL133547.1-201ENST00000448546 220 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 RBMY2UP-201ENST00000453474 324 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 AC146507.2-201ENST00000460608 476 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 RNA5SP112-201ENST00000515937 99 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 SNORA70.14-201ENST00000516205 110 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 MIR4765-201ENST00000585007 77 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 RPL30P11-203ENST00000598995 310 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 MIR6500-201ENST00000622700 86 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 AC007546.2-201ENST00000623996 360 ntBASIC3.86□□□□□ -1.79
PDGFAP04085 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDGFAP04085 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PDGFAP04085 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PDGFAP04085 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PDGFAP04085 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFAP04085 AC007256.1-201ENST00000392253 2765 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFAP04085 SNORD32B-201ENST00000364460 84 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 SNORA73.2-201ENST00000364946 201 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 Y_RNA.488-201ENST00000384403 102 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 MIR200C-201ENST00000384980 68 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 Z98941.1-201ENST00000407764 100 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 EBAG9P1-201ENST00000418955 543 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 RNA5SP246-201ENST00000458909 119 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFAP04085 RNU5F-4P-201ENST00000516581 114 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 AC021269.2-201ENST00000532318 330 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFAP04085 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.85□□□□□ -1.79
PDGFAP04085 AC103810.1-201ENST00000579873 453 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 AL121772.2-201ENST00000614331 297 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 MIR7151-201ENST00000617477 60 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFAP04085 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFAP04085 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFAP04085 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFAP04085 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.85□□□□□ -1.79
PDGFAP04085 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PDGFAP04085 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.85□□□□□ -1.79
PDGFAP04085 AC134026.1-201ENST00000623249 2239 ntBASIC3.85□□□□□ -1.79
PDGFAP04085 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
PDGFAP04085 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.84□□□□□ -1.79
PDGFAP04085 SNORA63.1-201ENST00000362493 131 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 Y_RNA.361-201ENST00000365515 120 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PDGFAP04085 SNORA74C-2-201ENST00000411179 201 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 RHEBP3-201ENST00000411920 351 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PDGFAP04085 RPS27P26-201ENST00000494583 239 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 AC026726.1-201ENST00000512859 601 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFAP04085 MIR4474-201ENST00000579189 78 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 MIR4744-201ENST00000581563 82 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.84□□□□□ -1.79
PDGFAP04085 AC008739.3-201ENST00000603262 127 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 Y_RNA.802-201ENST00000614892 130 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 AC090517.3-201ENST00000625170 141 ntBASIC3.84□□□□□ -1.79
PDGFAP04085 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
PDGFAP04085 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PDGFAP04085 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PDGFAP04085 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDGFAP04085 Y_RNA.497-201ENST00000384447 98 ntBASIC3.83□□□□□ -1.8
PDGFAP04085 MIR449B-201ENST00000384995 97 ntBASIC3.83□□□□□ -1.8
PDGFAP04085 MIR626-201ENST00000385032 94 ntBASIC3.83□□□□□ -1.8
PDGFAP04085 AC074290.1-201ENST00000448883 135 ntBASIC3.83□□□□□ -1.8
PDGFAP04085 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
PDGFAP04085 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFAP04085 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.83□□□□□ -1.8
PDGFAP04085 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PDGFAP04085 MIR3944-201ENST00000581277 108 ntBASIC3.83□□□□□ -1.8
PDGFAP04085 AC069294.1-201ENST00000608397 350 ntBASIC3.83□□□□□ -1.8
PDGFAP04085 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms