Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTCO2P15-201ENST00000532655 656 ntBASIC-0.16□□□□□ -2.43
SPTA1P02549 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.16□□□□□ -2.43
SPTA1P02549 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-0.16□□□□□ -2.43
SPTA1P02549 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.16□□□□□ -2.43
SPTA1P02549 SNORD115-24-201ENST00000363528 82 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 MIR520G-201ENST00000385064 90 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 MIR520H-201ENST00000385126 88 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.16□□□□□ -2.44
SPTA1P02549 AC002429.1-201ENST00000437672 148 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 AC020550.1-201ENST00000447385 163 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 CECR9-201ENST00000453421 199 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.16□□□□□ -2.44
SPTA1P02549 BTF3P15-201ENST00000455606 336 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 AC097473.1-201ENST00000508142 408 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.16□□□□□ -2.44
SPTA1P02549 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.16□□□□□ -2.44
SPTA1P02549 AC025627.3-201ENST00000582078 182 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 AP001981.2-201ENST00000603241 418 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 SNORA25.18-201ENST00000607153 114 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 MIR8054-201ENST00000620877 86 ntBASIC-0.16□□□□□ -2.44
SPTA1P02549 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.17□□□□□ -2.44
SPTA1P02549 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
SPTA1P02549 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.17□□□□□ -2.44
SPTA1P02549 RNU6-138P-201ENST00000515952 107 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 AC009902.1-201ENST00000519351 183 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.17□□□□□ -2.44
SPTA1P02549 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
SPTA1P02549 SNORA59B-202ENST00000578183 701 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-0.17□□□□□ -2.44
SPTA1P02549 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.17□□□□□ -2.44
SPTA1P02549 SNORA12.1-201ENST00000390873 148 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 AL034345.1-201ENST00000407768 123 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 AL008629.1-201ENST00000438615 184 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 MTCO3P45-201ENST00000443036 613 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.17□□□□□ -2.44
SPTA1P02549 FABP5P15-201ENST00000453566 214 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
SPTA1P02549 AC104136.1-201ENST00000512969 394 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 MTND4LP26-201ENST00000518144 282 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.17□□□□□ -2.44
SPTA1P02549 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.17□□□□□ -2.44
SPTA1P02549 AL391001.1-201ENST00000602747 715 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 MIR8076-201ENST00000611401 83 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 AC013476.2-201ENST00000614456 459 ntBASIC-0.17□□□□□ -2.44
SPTA1P02549 RNU6-655P-201ENST00000362858 107 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 RNU6-512P-201ENST00000364438 103 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 MIR760-201ENST00000390220 80 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 MIR1285-2-201ENST00000408311 88 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 MTND4P25-201ENST00000441039 533 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 SNRPEP8-201ENST00000442866 260 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 RNFT1P2-201ENST00000443064 757 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AC109445.1-201ENST00000512356 383 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 RNU6-917P-201ENST00000516294 104 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 RNU2-46P-201ENST00000517038 113 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.18□□□□□ -2.44
SPTA1P02549 AL353765.1-201ENST00000605514 183 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AC099654.9-201ENST00000637055 678 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AP000568.1-201ENST00000282964 442 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 MTCO1P21-201ENST00000416634 589 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.18□□□□□ -2.44
SPTA1P02549 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.18□□□□□ -2.44
SPTA1P02549 AC093850.1-201ENST00000454121 251 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 RPL39P38-201ENST00000467018 153 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 MTATP6P9-201ENST00000515039 680 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 RNA5SP481-201ENST00000516814 122 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AL391840.1-201ENST00000571144 367 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AL136363.2-201ENST00000604173 851 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AC112187.2-201ENST00000604345 283 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AL121992.2-201ENST00000606262 256 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AL391903.3-201ENST00000612158 163 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AC007014.2-201ENST00000615581 479 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AC009268.2-201ENST00000621925 457 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 AC019226.1-201ENST00000625666 515 ntBASIC-0.18□□□□□ -2.44
SPTA1P02549 SNORD31B-201ENST00000364977 69 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 RNU6-359P-201ENST00000365466 108 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AL359634.1-202ENST00000404721 284 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.19□□□□□ -2.44
SPTA1P02549 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.19□□□□□ -2.44
SPTA1P02549 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.19□□□□□ -2.44
SPTA1P02549 DPRXP1-201ENST00000426312 460 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 MTCO3P29-201ENST00000432119 779 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.19□□□□□ -2.44
SPTA1P02549 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.19□□□□□ -2.44
SPTA1P02549 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.19□□□□□ -2.44
SPTA1P02549 TMEM251P1-201ENST00000503717 318 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 RNU2-53P-201ENST00000516257 147 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC025678.1-201ENST00000567861 338 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC008147.4-201ENST00000617570 1204 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC119674.1-220ENST00000641502 1048 ntBASIC-0.19□□□□□ -2.44
SPTA1P02549 AC107982.1-201ENST00000507171 1300 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms