Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU4-26P-201ENST00000410270 107 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 EIF4EP2-201ENST00000422816 654 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AC012306.1-201ENST00000423267 114 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AC003989.2-201ENST00000440224 169 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AMD1P1-201ENST00000457220 922 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 snoU13.6-201ENST00000458785 104 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 RNU7-14P-201ENST00000459331 62 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AC130509.1-201ENST00000464158 433 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 Y_RNA.654-201ENST00000497848 106 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AC093534.1-201ENST00000504977 132 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 Y_RNA.704-201ENST00000516851 102 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 SNORD60.2-201ENST00000516883 86 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AL512360.1-201ENST00000555346 234 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AC092954.2-201ENST00000609103 430 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 U1.36-201ENST00000620684 176 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 AL359880.1-201ENST00000621879 266 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
HLA-DQA1P01909 ZNF355P-201ENST00000427301 3216 ntBASIC1.25□□□□□ -2.21
HLA-DQA1P01909 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNU6-227P-201ENST00000362865 103 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNU4-75P-201ENST00000364621 146 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNU6-438P-201ENST00000365561 103 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 MIR514A2-201ENST00000385131 88 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 MIR514A3-201ENST00000385132 88 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 SNORA48.1-201ENST00000390879 135 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNU6-1093P-201ENST00000391194 107 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNA5SP100-201ENST00000410903 110 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNA5SP59-201ENST00000410922 110 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC139712.2-201ENST00000424302 339 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNU6-1208P-201ENST00000459588 107 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC083904.1-201ENST00000487828 231 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RPL23AP63-201ENST00000498752 471 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC091885.1-201ENST00000506658 268 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 SNORA19.2-201ENST00000516013 114 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 Y_RNA.693-201ENST00000516641 110 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 MRPS36P4-201ENST00000534436 298 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 GNAI2P1-201ENST00000541815 315 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AL157687.1-201ENST00000554853 619 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC090517.1-201ENST00000569307 266 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 MIR4713-201ENST00000582691 75 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 RNU6-89P-201ENST00000606519 100 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC009994.1-201ENST00000606889 253 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC005520.5-201ENST00000613926 164 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.24□□□□□ -2.21
HLA-DQA1P01909 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.24□□□□□ -2.21
HLA-DQA1P01909 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.23□□□□□ -2.21
HLA-DQA1P01909 Y_RNA.41-201ENST00000362646 102 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 Y_RNA.372-201ENST00000365599 102 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 SNORA32.2-201ENST00000384049 122 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 RNU6-483P-201ENST00000384088 108 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 SNORA29-201ENST00000384183 140 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 RNU2-2P-201ENST00000410396 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 RNU2-16P-201ENST00000410712 136 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AC009310.1-201ENST00000414414 451 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.23□□□□□ -2.21
HLA-DQA1P01909 DLGAP5P1-201ENST00000430307 464 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AL359672.1-201ENST00000442302 409 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 Z83846.1-201ENST00000446798 265 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AC019235.1-201ENST00000503847 207 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.23□□□□□ -2.21
HLA-DQA1P01909 RNU5F-4P-201ENST00000516581 114 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 RNU6-1332P-201ENST00000516666 104 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 RNU6-567P-201ENST00000516746 107 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.23□□□□□ -2.21
HLA-DQA1P01909 SCOCP1-201ENST00000554676 349 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AC110588.1-201ENST00000559699 137 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 MIR4285-201ENST00000581001 85 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AC010900.2-201ENST00000604508 210 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 AC064807.4-201ENST00000607201 407 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.15-201ENST00000611544 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.16-201ENST00000613119 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.12-201ENST00000613778 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.20-201ENST00000613956 192 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 FAM157A-202ENST00000615155 405 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.9-201ENST00000615427 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.11-201ENST00000616345 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.2-201ENST00000616535 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.3-201ENST00000617785 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.19-201ENST00000618602 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 RNU2-1-201ENST00000618664 191 ntBASIC1.23□□□□□ -2.21
HLA-DQA1P01909 U2.6-201ENST00000619225 191 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms