Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX58O95786 NDUFA5P6-201ENST00000542110 379 ntBASIC2.5□□□□□ -2.01
DDX58O95786 MIR3923-201ENST00000579521 83 ntBASIC2.5□□□□□ -2.01
DDX58O95786 MIR5089-201ENST00000580047 84 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.5□□□□□ -2.01
DDX58O95786 MIR3672-201ENST00000584290 82 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AC078899.2-201ENST00000595282 212 ntBASIC2.5□□□□□ -2.01
DDX58O95786 BNIP3P10-201ENST00000605360 577 ntBASIC2.5□□□□□ -2.01
DDX58O95786 MIR6895-201ENST00000613497 78 ntBASIC2.5□□□□□ -2.01
DDX58O95786 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX58O95786 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
DDX58O95786 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX58O95786 AL356292.1-201ENST00000283110 373 ntBASIC2.49□□□□□ -2.01
DDX58O95786 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
DDX58O95786 RNU6-562P-201ENST00000362731 107 ntBASIC2.49□□□□□ -2.01
DDX58O95786 RNU6-1013P-201ENST00000384180 107 ntBASIC2.49□□□□□ -2.01
DDX58O95786 RNU6-611P-201ENST00000384276 104 ntBASIC2.49□□□□□ -2.01
DDX58O95786 U8.13-201ENST00000390842 128 ntBASIC2.49□□□□□ -2.01
DDX58O95786 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.49□□□□□ -2.01
DDX58O95786 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.49□□□□□ -2.01
DDX58O95786 AL133396.1-201ENST00000432048 687 ntBASIC2.49□□□□□ -2.01
DDX58O95786 AL021397.1-201ENST00000451806 248 ntBASIC2.49□□□□□ -2.01
DDX58O95786 RNU7-66P-201ENST00000459469 62 ntBASIC2.49□□□□□ -2.01
DDX58O95786 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.49□□□□□ -2.01
DDX58O95786 RNA5SP182-201ENST00000516064 82 ntBASIC2.49□□□□□ -2.01
DDX58O95786 RNU6-567P-201ENST00000516746 107 ntBASIC2.49□□□□□ -2.01
DDX58O95786 SNORA31.16-201ENST00000516773 139 ntBASIC2.49□□□□□ -2.01
DDX58O95786 RNA5SP137-201ENST00000516833 135 ntBASIC2.49□□□□□ -2.01
DDX58O95786 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.49□□□□□ -2.01
DDX58O95786 AF235103.2-201ENST00000525753 346 ntBASIC2.49□□□□□ -2.01
DDX58O95786 SCOCP1-201ENST00000554676 349 ntBASIC2.49□□□□□ -2.01
DDX58O95786 AC015712.3-201ENST00000559380 164 ntBASIC2.49□□□□□ -2.01
DDX58O95786 MIR4529-201ENST00000578110 78 ntBASIC2.49□□□□□ -2.01
DDX58O95786 AC007229.1-201ENST00000590455 412 ntBASIC2.49□□□□□ -2.01
DDX58O95786 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
DDX58O95786 AL138726.1-201ENST00000614873 333 ntBASIC2.49□□□□□ -2.01
DDX58O95786 AC006504.8-201ENST00000621046 635 ntBASIC2.49□□□□□ -2.01
DDX58O95786 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX58O95786 RNU4-15P-201ENST00000362613 141 ntBASIC2.48□□□□□ -2.01
DDX58O95786 RNU6-831P-201ENST00000384548 107 ntBASIC2.48□□□□□ -2.01
DDX58O95786 MIR144-201ENST00000384886 86 ntBASIC2.48□□□□□ -2.01
DDX58O95786 SNORA40.19-201ENST00000390846 128 ntBASIC2.48□□□□□ -2.01
DDX58O95786 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.48□□□□□ -2.01
DDX58O95786 AL590632.1-201ENST00000424289 371 ntBASIC2.48□□□□□ -2.01
DDX58O95786 AL645568.3-201ENST00000433683 316 ntBASIC2.48□□□□□ -2.01
DDX58O95786 IFNA20P-201ENST00000436840 528 ntBASIC2.48□□□□□ -2.01
DDX58O95786 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.48□□□□□ -2.01
DDX58O95786 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX58O95786 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX58O95786 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX58O95786 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX58O95786 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX58O95786 RNU1-40P-201ENST00000516816 164 ntBASIC2.48□□□□□ -2.01
DDX58O95786 RNU1-97P-201ENST00000516872 164 ntBASIC2.48□□□□□ -2.01
DDX58O95786 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
DDX58O95786 AC018630.3-201ENST00000542637 96 ntBASIC2.48□□□□□ -2.01
DDX58O95786 AC021231.3-201ENST00000558497 370 ntBASIC2.48□□□□□ -2.01
DDX58O95786 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
DDX58O95786 MIR3942-201ENST00000585264 109 ntBASIC2.48□□□□□ -2.01
DDX58O95786 AC023043.2-201ENST00000589678 1026 ntBASIC2.48□□□□□ -2.01
DDX58O95786 AP000654.2-201ENST00000605633 586 ntBASIC2.48□□□□□ -2.01
DDX58O95786 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DDX58O95786 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DDX58O95786 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
DDX58O95786 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
DDX58O95786 Y_RNA.123-201ENST00000363338 102 ntBASIC2.47□□□□□ -2.01
DDX58O95786 Y_RNA.151-201ENST00000363566 112 ntBASIC2.47□□□□□ -2.01
DDX58O95786 Y_RNA.248-201ENST00000364501 109 ntBASIC2.47□□□□□ -2.01
DDX58O95786 MIR583-201ENST00000384846 75 ntBASIC2.47□□□□□ -2.01
DDX58O95786 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
DDX58O95786 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
DDX58O95786 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX58O95786 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX58O95786 RPL23AP95-201ENST00000426806 265 ntBASIC2.47□□□□□ -2.01
DDX58O95786 Z82205.1-201ENST00000428456 297 ntBASIC2.47□□□□□ -2.01
DDX58O95786 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.47□□□□□ -2.01
DDX58O95786 USP9YP28-201ENST00000435142 589 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.47□□□□□ -2.01
DDX58O95786 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
DDX58O95786 PCMTD1P1-201ENST00000455560 355 ntBASIC2.47□□□□□ -2.01
DDX58O95786 RNU7-187P-201ENST00000458985 68 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AC018710.1-201ENST00000506509 158 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AC116337.1-201ENST00000509680 687 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX58O95786 RNU4-49P-201ENST00000516080 140 ntBASIC2.47□□□□□ -2.01
DDX58O95786 RNU6-295P-201ENST00000516901 104 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AC121758.2-201ENST00000553271 193 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX58O95786 AC109446.1-201ENST00000566172 220 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AC018638.8-201ENST00000588755 281 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AC002984.1-201ENST00000591692 448 ntBASIC2.47□□□□□ -2.01
DDX58O95786 MIR3976-201ENST00000606807 139 ntBASIC2.47□□□□□ -2.01
DDX58O95786 AL136221.1-201ENST00000621449 509 ntBASIC2.47□□□□□ -2.01
DDX58O95786 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.46□□□□□ -2.01
DDX58O95786 Y_RNA.212-201ENST00000364177 102 ntBASIC2.46□□□□□ -2.02
DDX58O95786 RNA5SP160-201ENST00000364866 120 ntBASIC2.46□□□□□ -2.02
DDX58O95786 SNORA6-201ENST00000384033 151 ntBASIC2.46□□□□□ -2.02
DDX58O95786 SNORA12-201ENST00000391162 147 ntBASIC2.46□□□□□ -2.02
DDX58O95786 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.46□□□□□ -2.02
DDX58O95786 FGF7P6-202ENST00000451282 293 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms