Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.47□□□□□ -2.49
POLR1AO95602 AC048346.1-201ENST00000510247 144 ntBASIC-0.47□□□□□ -2.49
POLR1AO95602 AC027338.1-201ENST00000514840 825 ntBASIC-0.47□□□□□ -2.49
POLR1AO95602 AC084824.4-201ENST00000620106 731 ntBASIC-0.47□□□□□ -2.49
POLR1AO95602 AL162725.1-201ENST00000435405 301 ntBASIC-0.48□□□□□ -2.49
POLR1AO95602 MTND5P13-201ENST00000513046 1079 ntBASIC-0.48□□□□□ -2.49
POLR1AO95602 RNU2-12P-201ENST00000517216 168 ntBASIC-0.48□□□□□ -2.49
POLR1AO95602 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
POLR1AO95602 AC112693.2-201ENST00000556538 232 ntBASIC-0.48□□□□□ -2.49
POLR1AO95602 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.48□□□□□ -2.49
POLR1AO95602 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.48□□□□□ -2.49
POLR1AO95602 SNORA18.1-201ENST00000363418 128 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 MIR145-201ENST00000384967 88 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 RNA5SP390-201ENST00000410191 113 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 AC016909.1-201ENST00000415916 166 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.49□□□□□ -2.49
POLR1AO95602 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.49□□□□□ -2.49
POLR1AO95602 GTF2IP3-201ENST00000433887 494 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 MTCO1P19-201ENST00000443487 500 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 RPL7P55-201ENST00000450522 746 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 SNORD4A-201ENST00000459174 72 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 RNU6-416P-201ENST00000516265 103 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 AC023157.2-201ENST00000540596 141 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 LARP7P2-201ENST00000575306 125 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.49□□□□□ -2.49
POLR1AO95602 AC092447.9-201ENST00000603395 144 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 AC112187.2-201ENST00000604345 283 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 AC063943.3-201ENST00000615562 356 ntBASIC-0.49□□□□□ -2.49
POLR1AO95602 SNORD115-24-201ENST00000363528 82 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 SUGT1P1-201ENST00000379514 476 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 MTCO2P8-201ENST00000412213 658 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 MTCO3P41-201ENST00000414801 328 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.5□□□□□ -2.49
POLR1AO95602 FABP5P15-201ENST00000453566 214 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 RPL18AP17-201ENST00000455326 198 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.5□□□□□ -2.49
POLR1AO95602 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.5□□□□□ -2.49
POLR1AO95602 AC093788.1-201ENST00000609356 927 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AC008147.4-201ENST00000617570 1204 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AC009268.2-201ENST00000621925 457 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AL157786.1-207ENST00000627771 695 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 RNU6-72P-201ENST00000384285 79 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AC027644.1-201ENST00000419595 298 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 MTCO2P34-201ENST00000421994 607 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 LARP1BP3-201ENST00000437229 869 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 MTATP6P30-201ENST00000443540 664 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 STAG3L5P-204ENST00000443759 179 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.5□□□□□ -2.49
POLR1AO95602 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AC087685.1-201ENST00000587507 141 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AL121992.2-201ENST00000606262 256 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AL596245.1-201ENST00000618994 362 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AL159153.1-201ENST00000619688 317 ntBASIC-0.5□□□□□ -2.49
POLR1AO95602 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.5□□□□□ -2.49
POLR1AO95602 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
POLR1AO95602 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 RNY1P8-201ENST00000383970 114 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 RNU6-747P-201ENST00000390928 104 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 RNU6-241P-201ENST00000391148 104 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 AC019178.2-201ENST00000423595 505 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.51□□□□□ -2.49
POLR1AO95602 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-0.51□□□□□ -2.49
POLR1AO95602 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.51□□□□□ -2.49
POLR1AO95602 MTND1P9-201ENST00000453775 944 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 RNU6-922P-201ENST00000516753 99 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 AL391001.1-201ENST00000602747 715 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 AC006157.1-201ENST00000611750 366 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.51□□□□□ -2.49
POLR1AO95602 AL050341.1-201ENST00000447743 313 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 MTCO2P18-201ENST00000457151 658 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
POLR1AO95602 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.52□□□□□ -2.49
POLR1AO95602 TPRKBP2-201ENST00000565969 475 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.52□□□□□ -2.49
POLR1AO95602 SNORD14C-201ENST00000365382 88 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.52□□□□□ -2.49
POLR1AO95602 RNU6-929P-201ENST00000384429 107 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 SNORA75.2-201ENST00000391138 150 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 SNORA75.3-201ENST00000391231 150 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AL139396.1-201ENST00000421137 167 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.52□□□□□ -2.49
POLR1AO95602 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.52□□□□□ -2.49
POLR1AO95602 MTCYBP10-201ENST00000424905 650 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AC110760.3-202ENST00000515177 371 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AP002001.1-203ENST00000534002 267 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AC090049.2-201ENST00000550377 109 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 SUB1P2-201ENST00000556401 297 ntBASIC-0.52□□□□□ -2.49
POLR1AO95602 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.52□□□□□ -2.49
POLR1AO95602 MIR3529-201ENST00000637713 78 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms