Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL391813.1-201ENST00000603098 260 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC092447.9-201ENST00000603395 144 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AP000942.3-201ENST00000603702 160 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC107294.3-201ENST00000609211 526 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.7□□□□□ -1.82
RAPGEF3O95398 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.7□□□□□ -1.82
RAPGEF3O95398 RBBP8P1-201ENST00000449447 1844 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RAPGEF3O95398 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAPGEF3O95398 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAPGEF3O95398 Y_RNA.314-201ENST00000365114 102 ntBASIC3.69□□□□□ -1.82
RAPGEF3O95398 MIR544A-201ENST00000384855 91 ntBASIC3.69□□□□□ -1.82
RAPGEF3O95398 RNU2-23P-201ENST00000410545 195 ntBASIC3.69□□□□□ -1.82
RAPGEF3O95398 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.69□□□□□ -1.82
RAPGEF3O95398 AC015911.1-201ENST00000495111 156 ntBASIC3.69□□□□□ -1.82
RAPGEF3O95398 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.69□□□□□ -1.82
RAPGEF3O95398 AC104581.2-201ENST00000572227 430 ntBASIC3.69□□□□□ -1.82
RAPGEF3O95398 AL162730.1-201ENST00000605734 292 ntBASIC3.69□□□□□ -1.82
RAPGEF3O95398 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RAPGEF3O95398 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.68□□□□□ -1.82
RAPGEF3O95398 MAPK10-322ENST00000641485 4530 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RAPGEF3O95398 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 RNU1-91P-201ENST00000364746 163 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 RNU6-1286P-201ENST00000383871 107 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 MIR767-201ENST00000390228 109 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 RN7SKP61-201ENST00000410642 295 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.68□□□□□ -1.82
RAPGEF3O95398 MRPS18CP6-201ENST00000423587 223 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 TRIAP1P1-201ENST00000427062 225 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.68□□□□□ -1.82
RAPGEF3O95398 RN7SL75P-201ENST00000461926 281 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.68□□□□□ -1.82
RAPGEF3O95398 AC144568.1-201ENST00000520139 137 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.68□□□□□ -1.82
RAPGEF3O95398 AC096772.1-201ENST00000609146 564 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 AL606534.2-204ENST00000635008 178 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 AC233981.2-201ENST00000611524 1614 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 AC002543.1-201ENST00000299783 1954 ntBASIC3.68□□□□□ -1.82
RAPGEF3O95398 AC069528.2-201ENST00000624849 1991 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.67□□□□□ -1.82
RAPGEF3O95398 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RAPGEF3O95398 RNU4-9P-201ENST00000364951 139 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 RNU6-968P-201ENST00000384076 107 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 MIR147B-201ENST00000390185 80 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 AC078809.1-201ENST00000427601 140 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 AC104564.1-201ENST00000493028 407 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 AC016632.1-201ENST00000503994 196 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 RNU7-175P-201ENST00000515915 61 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 SNORA9.3-201ENST00000516383 129 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.67□□□□□ -1.82
RAPGEF3O95398 MIR4680-201ENST00000580906 66 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 AC007792.1-201ENST00000623023 402 ntBASIC3.67□□□□□ -1.82
RAPGEF3O95398 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.67□□□□□ -1.82
RAPGEF3O95398 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RAPGEF3O95398 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RAPGEF3O95398 AC005592.1-201ENST00000566527 1640 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 AP000560.1-201ENST00000624150 1937 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 SNORA64-201ENST00000384674 134 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 AL512633.1-201ENST00000399931 655 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 Y_RNA.595-201ENST00000410403 105 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 Z98742.2-201ENST00000431564 187 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 RPS29P12-201ENST00000460178 152 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 AC105758.1-201ENST00000506038 399 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 RNU4-77P-201ENST00000516692 156 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 RPL23AP78-201ENST00000599928 470 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 AL355877.2-201ENST00000603670 358 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.66□□□□□ -1.82
RAPGEF3O95398 SCARNA4-201ENST00000629045 128 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RAPGEF3O95398 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RAPGEF3O95398 MTND4P1-201ENST00000457501 1466 ntBASIC3.66□□□□□ -1.82
RAPGEF3O95398 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.66□□□□□ -1.82
RAPGEF3O95398 AC099654.7-201ENST00000635788 2127 ntBASIC3.65□□□□□ -1.82
RAPGEF3O95398 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
RAPGEF3O95398 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RAPGEF3O95398 AC092268.1-201ENST00000342691 405 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 RNA5SP494-201ENST00000410653 129 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AL160004.2-201ENST00000432935 350 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 RPL39P29-201ENST00000447779 157 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AP004217.1-201ENST00000480579 346 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 GZMAP1-201ENST00000503054 631 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AC026436.1-201ENST00000510537 270 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.65□□□□□ -1.83
RAPGEF3O95398 Y_RNA.721-201ENST00000517207 102 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AC115990.1-201ENST00000526957 301 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AC105137.2-201ENST00000569073 466 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 MIR4498-201ENST00000577599 66 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AC008737.2-201ENST00000599446 118 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 AC100812.1-201ENST00000607622 580 ntBASIC3.65□□□□□ -1.83
RAPGEF3O95398 RNU4-42P-201ENST00000364738 142 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 SNORA80E-201ENST00000384744 137 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 SNORA12.2-201ENST00000391040 156 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 RNU6-985P-201ENST00000410182 104 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 RPL23AP36-201ENST00000413895 458 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
RAPGEF3O95398 CYCSP48-201ENST00000417124 323 ntBASIC3.64□□□□□ -1.83
RAPGEF3O95398 AL358453.1-201ENST00000422522 250 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms