Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 Y_RNA.384-201ENST00000383909 102 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RNU6-611P-201ENST00000384276 104 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RNU1-148P-201ENST00000384472 162 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 NDUFB4P4-201ENST00000404822 243 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX2-2O95096 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX2-2O95096 RN7SKP210-201ENST00000459176 261 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RPL30P10-201ENST00000488148 337 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 AC068781.1-201ENST00000488231 618 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 MTND3P22-201ENST00000510932 243 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RNA5SP384-201ENST00000516615 116 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RNU6-826P-201ENST00000516827 104 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 AC034114.1-201ENST00000520293 285 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX2-2O95096 FRG2DP-202ENST00000566967 323 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 AL355375.2-201ENST00000574825 175 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX2-2O95096 MIR5690-201ENST00000583739 73 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 AC005014.2-201ENST00000607795 599 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 RMST_6.1-201ENST00000611980 203 ntBASIC2.32□□□□□ -2.04
NKX2-2O95096 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR196B-201ENST00000384852 84 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NKX2-2O95096 RNU6-1093P-201ENST00000391194 107 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MTCYBP4-201ENST00000401524 249 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX2-2O95096 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX2-2O95096 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX2-2O95096 Z82188.1-201ENST00000436709 154 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 snoU13.30-201ENST00000458951 104 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX2-2O95096 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 RNU6-307P-201ENST00000516743 106 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 AP000889.1-201ENST00000530968 660 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 AL590705.4-201ENST00000532209 134 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 AC104581.2-201ENST00000572227 430 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR5701-3-201ENST00000578890 82 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR3670-2-201ENST00000582974 65 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR3670-1-201ENST00000584160 65 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR3670-3-201ENST00000584855 65 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR5701-1-201ENST00000585138 82 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 RPL17P51-201ENST00000605218 238 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR3670-4-201ENST00000612260 65 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 MIR5701-2-201ENST00000615634 82 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 AC112487.2-201ENST00000637950 304 ntBASIC2.31□□□□□ -2.04
NKX2-2O95096 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-2O95096 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX2-2O95096 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
NKX2-2O95096 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.3□□□□□ -2.04
NKX2-2O95096 Y_RNA.48-201ENST00000362710 103 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 SNORA5B-201ENST00000363786 132 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 SNORD115-8-201ENST00000363856 82 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 SNORD115-38-201ENST00000365037 82 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 RNU6-26P-201ENST00000383985 107 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 SNORA41-201ENST00000384675 132 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 SNRPEP8-201ENST00000442866 260 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 AC007215.1-201ENST00000464893 276 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX2-2O95096 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 RNU6-1213P-201ENST00000517075 94 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 RNU6-667P-201ENST00000517186 102 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 HSPE1P18-201ENST00000517602 280 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 RAB11AP2-201ENST00000545905 639 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 AC004486.1-201ENST00000546846 233 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 AL117336.2-201ENST00000602435 335 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 AL356575.1-201ENST00000603008 283 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 7SK.7-201ENST00000603504 247 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
NKX2-2O95096 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.3□□□□□ -2.04
NKX2-2O95096 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NKX2-2O95096 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NKX2-2O95096 RNA5SP68-201ENST00000363885 119 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 RNU1-52P-201ENST00000384190 164 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 RNU6-17P-201ENST00000384245 107 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 SNORD116-29-201ENST00000384516 83 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 RNU6-18P-201ENST00000384527 107 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 RNU6-310P-201ENST00000384655 107 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 RNU6-331P-201ENST00000384724 107 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 MIR518C-201ENST00000384822 101 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 MIR153-2-201ENST00000385225 87 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NKX2-2O95096 Y_RNA.646-201ENST00000410980 101 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX2-2O95096 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-2O95096 AC097473.1-201ENST00000508142 408 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 SCARNA16.2-201ENST00000516520 172 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 RNU6-965P-201ENST00000516721 96 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-2O95096 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.29□□□□□ -2.04
NKX2-2O95096 AC093027.1-201ENST00000546698 429 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.29□□□□□ -2.04
NKX2-2O95096 AC026470.2-201ENST00000561492 181 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.29□□□□□ -2.04
NKX2-2O95096 MIR1248-201ENST00000629190 106 ntBASIC2.29□□□□□ -2.04
NKX2-2O95096 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
NKX2-2O95096 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms