Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 Y_RNA.463-201ENST00000384271 102 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 RPS20P15-201ENST00000412792 311 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 AC027124.2-201ENST00000428249 105 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.32□□□□□ -1.88
CLSTN1O94985 IFNA11P-201ENST00000446352 526 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 RNU6-1170P-201ENST00000515974 106 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 RNA5SP341-201ENST00000516261 117 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.32□□□□□ -1.88
CLSTN1O94985 AC009127.3-201ENST00000570531 403 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 AC100812.1-201ENST00000607622 580 ntBASIC3.32□□□□□ -1.88
CLSTN1O94985 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.32□□□□□ -1.88
CLSTN1O94985 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.32□□□□□ -1.88
CLSTN1O94985 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLSTN1O94985 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLSTN1O94985 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.31□□□□□ -1.88
CLSTN1O94985 MIR422A-201ENST00000362286 90 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RNU6-222P-201ENST00000362438 107 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RNU6-490P-201ENST00000362985 107 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RNU6-743P-201ENST00000364151 106 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RNY3P11-201ENST00000364153 102 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RNU6-546P-201ENST00000383991 107 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 MIR190B-201ENST00000401119 79 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RNA5SP274-201ENST00000410484 108 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.31□□□□□ -1.88
CLSTN1O94985 WARS2P1-201ENST00000429678 537 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 GSTA11P-201ENST00000452866 669 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.31□□□□□ -1.88
CLSTN1O94985 SNORA48.11-201ENST00000517015 89 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RNU6-58P-201ENST00000517143 103 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 RN7SKP57-201ENST00000517248 293 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.31□□□□□ -1.88
CLSTN1O94985 UBL5P4-201ENST00000562584 236 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.31□□□□□ -1.88
CLSTN1O94985 AL035425.3-201ENST00000564206 4996 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLSTN1O94985 ZNF204P-201ENST00000416749 2397 ntBASIC3.31□□□□□ -1.88
CLSTN1O94985 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CLSTN1O94985 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLSTN1O94985 Y_RNA.197-201ENST00000364004 102 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 SNORA71.1-201ENST00000364523 117 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 Y_RNA.319-201ENST00000365138 92 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 MIR561-201ENST00000385216 97 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 UBA52P6-201ENST00000399822 382 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 MIR1294-201ENST00000408503 142 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 RPS26P42-201ENST00000413485 326 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 AC007098.1-201ENST00000420122 367 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 MTND4P28-201ENST00000426217 387 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 AP000870.1-201ENST00000472927 406 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 AP004217.1-201ENST00000480579 346 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 AC107032.1-201ENST00000485945 480 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.3□□□□□ -1.88
CLSTN1O94985 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.3□□□□□ -1.88
CLSTN1O94985 Y_RNA.661-201ENST00000516003 99 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 RNA5SP76-201ENST00000516277 87 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 RNU6-1153P-201ENST00000516760 105 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.3□□□□□ -1.88
CLSTN1O94985 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.3□□□□□ -1.88
CLSTN1O94985 AC027288.2-201ENST00000553028 243 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.3□□□□□ -1.88
CLSTN1O94985 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.3□□□□□ -1.88
CLSTN1O94985 AC090971.5-201ENST00000621102 293 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 MIR1248-201ENST00000629190 106 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 MIR6733-201ENST00000635723 61 ntBASIC3.3□□□□□ -1.88
CLSTN1O94985 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLSTN1O94985 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.29□□□□□ -1.88
CLSTN1O94985 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLSTN1O94985 Y_RNA.5-201ENST00000362334 102 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 Y_RNA.11-201ENST00000362375 109 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 RNU6-1115P-201ENST00000362490 106 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 Y_RNA.314-201ENST00000365114 102 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 SNORA18.2-201ENST00000383865 132 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 Y_RNA.577-201ENST00000384794 101 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 AL138885.1-201ENST00000405921 675 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 CBX3P6-201ENST00000430257 527 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 AL035666.1-201ENST00000446195 348 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 RNU7-169P-201ENST00000459456 61 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 RPS27AP9-201ENST00000477681 438 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 AC018868.1-201ENST00000491307 315 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 AC022080.3-201ENST00000544433 482 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 MYL12BP1-201ENST00000569826 507 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 MIR5004-201ENST00000579078 107 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 SNORD14A-201ENST00000606526 91 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 MTND5P16-201ENST00000460269 1703 ntBASIC3.29□□□□□ -1.88
CLSTN1O94985 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLSTN1O94985 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CLSTN1O94985 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CLSTN1O94985 Y_RNA.138-201ENST00000363462 102 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 Y_RNA.358-201ENST00000365491 99 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 SNORD42.2-201ENST00000365570 69 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 RNU6-26P-201ENST00000383985 107 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 SNORD88.1-201ENST00000408684 91 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.28□□□□□ -1.88
CLSTN1O94985 UBE2V1P7-201ENST00000446395 340 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.28□□□□□ -1.88
CLSTN1O94985 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.28□□□□□ -1.88
CLSTN1O94985 RNA5SP82-201ENST00000516707 92 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 Y_RNA.701-201ENST00000516812 110 ntBASIC3.28□□□□□ -1.88
CLSTN1O94985 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms