Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNA5SP76-201ENST00000516277 87 ntBASIC3.19□□□□□ -1.9
CDKL5O76039 RNU6-928P-201ENST00000516876 104 ntBASIC3.19□□□□□ -1.9
CDKL5O76039 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL5O76039 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDKL5O76039 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDKL5O76039 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CDKL5O76039 AC073410.2-201ENST00000603240 332 ntBASIC3.19□□□□□ -1.9
CDKL5O76039 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDKL5O76039 MIR6134-201ENST00000617606 109 ntBASIC3.19□□□□□ -1.9
CDKL5O76039 SDR42E1P4-201ENST00000620894 481 ntBASIC3.19□□□□□ -1.9
CDKL5O76039 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL5O76039 RNU6-222P-201ENST00000362438 107 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 U3.13-201ENST00000364804 214 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 RNU6-968P-201ENST00000384076 107 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 SNORA18.3-201ENST00000384122 132 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 MIR888-201ENST00000401186 77 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 AL138827.1-201ENST00000402666 306 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 AL135938.1-201ENST00000443141 297 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 AC124916.1-201ENST00000444020 547 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 snoU13.30-201ENST00000458951 104 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 RPL39P38-201ENST00000467018 153 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 RPL30P1-201ENST00000488676 339 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 AP002770.2-201ENST00000543613 532 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL5O76039 SCARNA4-201ENST00000629045 128 ntBASIC3.18□□□□□ -1.9
CDKL5O76039 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.18□□□□□ -1.9
CDKL5O76039 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL5O76039 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL5O76039 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 SNORD56.5-201ENST00000364281 72 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 RNU4-9P-201ENST00000364951 139 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 CD24P4-201ENST00000382840 243 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 RNY3P4-201ENST00000384428 101 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 Y_RNA.552-201ENST00000384665 112 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 MIR215-201ENST00000384858 110 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CDKL5O76039 RNU6-1093P-201ENST00000391194 107 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDKL5O76039 RNA5SP21-201ENST00000410917 96 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 HMGN2P35-201ENST00000412164 270 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AL591043.1-201ENST00000432461 424 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AC009296.1-201ENST00000443146 155 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 Z96811.1-201ENST00000445880 108 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 MTND4LP30-201ENST00000454092 297 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AC006026.2-201ENST00000457376 180 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 RPL23AP75-201ENST00000491601 451 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AF186996.7-201ENST00000492781 209 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 RNU6-1023P-201ENST00000516137 106 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 Y_RNA.673-201ENST00000516306 88 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AC091144.1-201ENST00000519573 138 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.17□□□□□ -1.9
CDKL5O76039 AC136932.1-201ENST00000574771 208 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AC012433.1-201ENST00000588916 398 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AL355877.2-201ENST00000603670 358 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AP001282.2-201ENST00000616149 309 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 U6.104-201ENST00000637979 90 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 MTND5P6-201ENST00000422338 1798 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
CDKL5O76039 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
CDKL5O76039 SNORD56.1-201ENST00000362913 68 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 Y_RNA.84-201ENST00000363011 104 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 RNU6-1286P-201ENST00000383871 107 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 RNU6-1035P-201ENST00000384477 107 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDKL5O76039 FTH1P15-201ENST00000406984 280 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 RNU2-25P-201ENST00000411041 191 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 Z92545.1-201ENST00000411782 234 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.16□□□□□ -1.9
CDKL5O76039 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.16□□□□□ -1.9
CDKL5O76039 AC139712.2-201ENST00000424302 339 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 SDAD1P3-201ENST00000427380 333 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.16□□□□□ -1.9
CDKL5O76039 UBBP3-201ENST00000445497 241 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AL353705.4-201ENST00000449661 238 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AC103975.1-201ENST00000482506 483 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 RNA5SP367-201ENST00000516557 118 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AC090617.3-201ENST00000573670 475 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AL451007.1-201ENST00000595491 289 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AC005000.2-201ENST00000605468 310 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
CDKL5O76039 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.15□□□□□ -1.9
CDKL5O76039 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDKL5O76039 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDKL5O76039 RNU6-212P-201ENST00000362642 104 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 snoU2_19.2-201ENST00000363024 80 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 SNORD32A-201ENST00000364805 84 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 RNU6-17P-201ENST00000384245 107 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 RNU6-18P-201ENST00000384527 107 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 MIR128-1-201ENST00000384921 82 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDKL5O76039 AL139095.1-201ENST00000404326 391 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 RNU6-1203P-201ENST00000410703 110 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 AC099548.1-201ENST00000421443 426 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 TMEM167AP1-201ENST00000423409 219 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 AC112220.1-201ENST00000434628 355 ntBASIC3.15□□□□□ -1.91
CDKL5O76039 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms