Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SUB1P2-201ENST00000556401 297 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.06□□□□□ -2.24
UPK1BO75841 SNORD53B-201ENST00000577887 78 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AF131215.7-201ENST00000602443 707 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AP003465.2-201ENST00000602571 373 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AC126177.8-201ENST00000618339 1015 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.06□□□□□ -2.24
UPK1BO75841 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.06□□□□□ -2.24
UPK1BO75841 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
UPK1BO75841 SNORD114-1-201ENST00000362705 72 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 SNORA63D-201ENST00000364359 132 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 Y_RNA.500-201ENST00000384466 111 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 PIGFP2-201ENST00000421400 651 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AL365203.2-201ENST00000423444 196 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.05□□□□□ -2.24
UPK1BO75841 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.05□□□□□ -2.24
UPK1BO75841 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1BO75841 SNRPFP3-201ENST00000457792 225 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.05□□□□□ -2.24
UPK1BO75841 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
UPK1BO75841 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.05□□□□□ -2.24
UPK1BO75841 AC105417.1-201ENST00000514691 285 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 RNA5SP384-201ENST00000516615 116 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 RN7SKP219-201ENST00000516825 296 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AC069113.1-201ENST00000517763 267 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.05□□□□□ -2.24
UPK1BO75841 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1BO75841 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.05□□□□□ -2.24
UPK1BO75841 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.05□□□□□ -2.24
UPK1BO75841 AC015720.1-201ENST00000565251 277 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AC008536.2-201ENST00000607284 349 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AC009318.2-201ENST00000610917 651 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AC087683.2-201ENST00000611384 326 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AC005520.5-201ENST00000613926 164 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 AC008147.4-201ENST00000617570 1204 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
UPK1BO75841 AC009541.1-201ENST00000438279 2662 ntBASIC1.05□□□□□ -2.24
UPK1BO75841 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
UPK1BO75841 SNORA4.2-201ENST00000365313 147 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 Y_RNA.399-201ENST00000383955 105 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 SNORA70B-201ENST00000384210 135 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 RNU6-606P-201ENST00000384721 111 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 RNU6-903P-201ENST00000391270 109 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 RPL17P50-201ENST00000396131 546 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 RNU2-29P-201ENST00000410423 189 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AP000275.1-201ENST00000411943 390 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AL161935.2-201ENST00000414627 60 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 MTCO1P21-201ENST00000416634 589 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.04□□□□□ -2.24
UPK1BO75841 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK1BO75841 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.04□□□□□ -2.24
UPK1BO75841 FTH1P12-201ENST00000432137 551 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AL358934.1-201ENST00000432346 324 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AC244505.5-201ENST00000443639 207 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AC073910.1-201ENST00000445047 438 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 RNU7-167P-201ENST00000459160 62 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 TRBV12-1-201ENST00000479785 344 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.04□□□□□ -2.24
UPK1BO75841 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.04□□□□□ -2.24
UPK1BO75841 RNA5SP481-201ENST00000516814 122 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 RNU6-856P-201ENST00000516959 98 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AL137161.1-201ENST00000532231 390 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AC015688.6-201ENST00000577737 104 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 MTATP6P3-201ENST00000581686 676 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 AC064807.4-201ENST00000607201 407 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.04□□□□□ -2.24
UPK1BO75841 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
UPK1BO75841 RNA5SP327-201ENST00000362494 101 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
UPK1BO75841 AC090960.1-201ENST00000421072 306 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 MTCYBP8-201ENST00000422855 651 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK1BO75841 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK1BO75841 AL445567.1-201ENST00000439121 144 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 C1DP4-201ENST00000455429 424 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 GMFBP1-201ENST00000467831 427 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 AC011406.1-201ENST00000512440 370 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 RNU6-323P-201ENST00000521915 107 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 AC090115.3-201ENST00000553218 849 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 CYP3A52P-201ENST00000563326 91 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 U2.17-201ENST00000611454 95 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.03□□□□□ -2.24
UPK1BO75841 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK1BO75841 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.03□□□□□ -2.24
UPK1BO75841 AL390237.1-201ENST00000404226 1415 ntBASIC1.03□□□□□ -2.24
UPK1BO75841 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPK1BO75841 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
UPK1BO75841 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPK1BO75841 SNORA33-201ENST00000363664 130 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 Y_RNA.255-201ENST00000364581 97 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 RNU6-60P-201ENST00000364792 103 ntBASIC1.02□□□□□ -2.25
UPK1BO75841 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
UPK1BO75841 U8.13-201ENST00000390842 128 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms