Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AL603755.1-201ENST00000619504 163 ntBASIC1.17□□□□□ -2.22
BRD4O60885 AL603839.4-201ENST00000624658 1005 ntBASIC1.17□□□□□ -2.22
BRD4O60885 AC010487.4-201ENST00000637027 61 ntBASIC1.17□□□□□ -2.22
BRD4O60885 RNU6-212P-201ENST00000362642 104 ntBASIC1.16□□□□□ -2.22
BRD4O60885 RNU5E-7P-201ENST00000365290 117 ntBASIC1.16□□□□□ -2.22
BRD4O60885 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
BRD4O60885 SNORA29-201ENST00000384183 140 ntBASIC1.16□□□□□ -2.22
BRD4O60885 SNORA22C-201ENST00000384614 134 ntBASIC1.16□□□□□ -2.22
BRD4O60885 MT-TH-201ENST00000387441 69 ntBASIC1.16□□□□□ -2.22
BRD4O60885 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
BRD4O60885 CBX3P9-201ENST00000402326 552 ntBASIC1.16□□□□□ -2.22
BRD4O60885 RNU6-195P-201ENST00000411352 109 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AL031779.1-201ENST00000415663 330 ntBASIC1.16□□□□□ -2.22
BRD4O60885 GPR143P-201ENST00000434155 205 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AL135790.2-201ENST00000437701 267 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.16□□□□□ -2.22
BRD4O60885 AL035666.1-201ENST00000446195 348 ntBASIC1.16□□□□□ -2.22
BRD4O60885 MTND3P25-201ENST00000509243 135 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AC074344.1-201ENST00000512823 224 ntBASIC1.16□□□□□ -2.22
BRD4O60885 RNU1-86P-201ENST00000516108 154 ntBASIC1.16□□□□□ -2.22
BRD4O60885 RNU1-107P-201ENST00000516617 154 ntBASIC1.16□□□□□ -2.22
BRD4O60885 SNORA31.17-201ENST00000516953 127 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AP002453.2-201ENST00000533503 320 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.16□□□□□ -2.22
BRD4O60885 RMST_7.1-201ENST00000621935 268 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AC093648.1-201ENST00000623546 606 ntBASIC1.16□□□□□ -2.22
BRD4O60885 AC008993.2-201ENST00000631744 806 ntBASIC1.16□□□□□ -2.22
BRD4O60885 Y_RNA.99-201ENST00000363138 105 ntBASIC1.15□□□□□ -2.23
BRD4O60885 RNU6-1097P-201ENST00000363586 107 ntBASIC1.15□□□□□ -2.23
BRD4O60885 RNY3P10-201ENST00000384764 102 ntBASIC1.15□□□□□ -2.23
BRD4O60885 EEF1A1P40-201ENST00000412883 573 ntBASIC1.15□□□□□ -2.23
BRD4O60885 AC009961.2-201ENST00000435771 251 ntBASIC1.15□□□□□ -2.23
BRD4O60885 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.15□□□□□ -2.23
BRD4O60885 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.15□□□□□ -2.23
BRD4O60885 ART2BP-201ENST00000453501 499 ntBASIC1.15□□□□□ -2.23
BRD4O60885 RNA5SP269-201ENST00000459032 137 ntBASIC1.15□□□□□ -2.23
BRD4O60885 SNORD42A-201ENST00000459584 64 ntBASIC1.15□□□□□ -2.23
BRD4O60885 AC092989.1-201ENST00000481235 277 ntBASIC1.15□□□□□ -2.23
BRD4O60885 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.15□□□□□ -2.23
BRD4O60885 RNU7-40P-201ENST00000516397 64 ntBASIC1.15□□□□□ -2.23
BRD4O60885 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.15□□□□□ -2.23
BRD4O60885 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.15□□□□□ -2.23
BRD4O60885 Z84480.1-201ENST00000605131 311 ntBASIC1.15□□□□□ -2.23
BRD4O60885 Z82243.1-201ENST00000609432 473 ntBASIC1.15□□□□□ -2.23
BRD4O60885 SEPT14P19-203ENST00000633205 211 ntBASIC1.15□□□□□ -2.23
BRD4O60885 MIR924-201ENST00000638017 53 ntBASIC1.15□□□□□ -2.23
BRD4O60885 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.15□□□□□ -2.23
BRD4O60885 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
BRD4O60885 SNORD114-23-201ENST00000363536 72 ntBASIC1.14□□□□□ -2.23
BRD4O60885 MIR29B2-201ENST00000385055 81 ntBASIC1.14□□□□□ -2.23
BRD4O60885 RNU6-1245P-201ENST00000411130 106 ntBASIC1.14□□□□□ -2.23
BRD4O60885 RNU6-607P-201ENST00000411283 108 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.14□□□□□ -2.23
BRD4O60885 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.14□□□□□ -2.23
BRD4O60885 BX295541.1-201ENST00000417774 250 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.14□□□□□ -2.23
BRD4O60885 AC139712.2-201ENST00000424302 339 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AC000111.3-201ENST00000433478 193 ntBASIC1.14□□□□□ -2.23
BRD4O60885 RNU7-182P-201ENST00000459009 62 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AC087477.1-201ENST00000465747 340 ntBASIC1.14□□□□□ -2.23
BRD4O60885 RPL30P1-201ENST00000488676 339 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.14□□□□□ -2.23
BRD4O60885 RNA5SP330-201ENST00000517096 96 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.14□□□□□ -2.23
BRD4O60885 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.14□□□□□ -2.23
BRD4O60885 AC245014.2-201ENST00000603689 287 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AC246785.4-201ENST00000605374 287 ntBASIC1.14□□□□□ -2.23
BRD4O60885 AC011155.2-201ENST00000623202 216 ntBASIC1.14□□□□□ -2.23
BRD4O60885 SNORD1A-201ENST00000364968 72 ntBASIC1.13□□□□□ -2.23
BRD4O60885 RNU6-108P-201ENST00000365558 107 ntBASIC1.13□□□□□ -2.23
BRD4O60885 RNU6-45P-201ENST00000384471 107 ntBASIC1.13□□□□□ -2.23
BRD4O60885 MIR544A-201ENST00000384855 91 ntBASIC1.13□□□□□ -2.23
BRD4O60885 MIR454-201ENST00000390180 115 ntBASIC1.13□□□□□ -2.23
BRD4O60885 MTND2P18-201ENST00000419962 1030 ntBASIC1.13□□□□□ -2.23
BRD4O60885 AL590556.1-201ENST00000423231 483 ntBASIC1.13□□□□□ -2.23
BRD4O60885 FTH1P12-201ENST00000432137 551 ntBASIC1.13□□□□□ -2.23
BRD4O60885 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.13□□□□□ -2.23
BRD4O60885 snoU13.14-201ENST00000459372 104 ntBASIC1.13□□□□□ -2.23
BRD4O60885 AC010409.1-201ENST00000487382 476 ntBASIC1.13□□□□□ -2.23
BRD4O60885 AC079140.2-201ENST00000506193 142 ntBASIC1.13□□□□□ -2.23
BRD4O60885 MTND2P33-201ENST00000506452 1031 ntBASIC1.13□□□□□ -2.23
BRD4O60885 MTCO3P9-201ENST00000506989 781 ntBASIC1.13□□□□□ -2.23
BRD4O60885 MTCYBP40-201ENST00000509390 1135 ntBASIC1.13□□□□□ -2.23
BRD4O60885 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.13□□□□□ -2.23
BRD4O60885 RNU6-1178P-201ENST00000516674 107 ntBASIC1.13□□□□□ -2.23
BRD4O60885 RN7SKP256-201ENST00000517201 314 ntBASIC1.13□□□□□ -2.23
BRD4O60885 DEFB108E-201ENST00000524692 240 ntBASIC1.13□□□□□ -2.23
BRD4O60885 AP001893.2-201ENST00000526949 202 ntBASIC1.13□□□□□ -2.23
BRD4O60885 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.13□□□□□ -2.23
BRD4O60885 AC018630.3-201ENST00000542637 96 ntBASIC1.13□□□□□ -2.23
BRD4O60885 SNORA77B-201ENST00000578179 125 ntBASIC1.13□□□□□ -2.23
BRD4O60885 MIR4775-201ENST00000581168 75 ntBASIC1.13□□□□□ -2.23
BRD4O60885 NIFKP6-201ENST00000598115 845 ntBASIC1.13□□□□□ -2.23
BRD4O60885 7SK.7-201ENST00000603504 247 ntBASIC1.13□□□□□ -2.23
BRD4O60885 Z99289.3-201ENST00000605586 594 ntBASIC1.13□□□□□ -2.23
BRD4O60885 RMST_4.1-201ENST00000616886 107 ntBASIC1.13□□□□□ -2.23
BRD4O60885 uc_338.11-201ENST00000619132 160 ntBASIC1.13□□□□□ -2.23
BRD4O60885 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
BRD4O60885 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
BRD4O60885 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms