Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL354696.1-201ENST00000614652 497 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 MIR338-201ENST00000636369 67 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 AC073544.1-201ENST00000600110 1595 ntBASIC-0.24□□□□□ -2.45
SSSCA1O60232 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 SNORD65.1-201ENST00000390889 71 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 RNU6-700P-201ENST00000391043 107 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AL590623.1-201ENST00000427864 105 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.25□□□□□ -2.45
SSSCA1O60232 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.25□□□□□ -2.45
SSSCA1O60232 AL162725.1-201ENST00000435405 301 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC104332.1-201ENST00000440471 797 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AL133217.1-201ENST00000450980 425 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC245047.8-201ENST00000456455 284 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC026414.1-201ENST00000504046 698 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.25□□□□□ -2.45
SSSCA1O60232 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.25□□□□□ -2.45
SSSCA1O60232 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC109446.1-201ENST00000566172 220 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 MIR4789-201ENST00000577469 82 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC110760.3-201ENST00000598794 467 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 RNU4-5P-201ENST00000607255 135 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC136475.10-201ENST00000620253 385 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC097372.5-201ENST00000623665 376 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 AC008133.2-201ENST00000624540 351 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 SCARNA4-202ENST00000625402 129 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.25□□□□□ -2.45
SSSCA1O60232 MTND5P42-201ENST00000637720 498 ntBASIC-0.25□□□□□ -2.45
SSSCA1O60232 MIR330-201ENST00000362196 94 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 RNU6-222P-201ENST00000362438 107 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 U8.7-201ENST00000364940 136 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 RNU6-716P-201ENST00000365621 103 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 MIR10A-201ENST00000385043 110 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 MIR518A1-201ENST00000385068 85 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 MIR653-201ENST00000385279 96 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 RNA5SP496-201ENST00000391240 109 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AL451046.2-201ENST00000403074 277 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 RNU2-42P-201ENST00000410697 113 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.26□□□□□ -2.45
SSSCA1O60232 AL627311.1-201ENST00000431514 115 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 SNORA31.10-201ENST00000516482 106 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AC109810.1-201ENST00000534066 224 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AC023157.2-201ENST00000540596 141 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AC122134.1-202ENST00000569111 1201 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 RN7SL793P-201ENST00000583259 296 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.26□□□□□ -2.45
SSSCA1O60232 AC022893.3-201ENST00000607665 437 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AL136317.1-201ENST00000612653 226 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 AC091925.1-201ENST00000623204 462 ntBASIC-0.26□□□□□ -2.45
SSSCA1O60232 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.26□□□□□ -2.45
SSSCA1O60232 RNY1P14-201ENST00000384426 108 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 RNY1P4-201ENST00000384595 115 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.27□□□□□ -2.45
SSSCA1O60232 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.27□□□□□ -2.45
SSSCA1O60232 MTCO2P18-201ENST00000457151 658 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.27□□□□□ -2.45
SSSCA1O60232 AC006026.2-201ENST00000457376 180 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 MTND3P5-201ENST00000512798 333 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 MTND4LP26-201ENST00000518144 282 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 AC090049.2-201ENST00000550377 109 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 AL606834.3-201ENST00000602615 496 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 AC100814.1-201ENST00000606963 623 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 AC104073.3-201ENST00000610942 955 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 MIR8087-201ENST00000612745 78 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 AL157770.1-201ENST00000623049 439 ntBASIC-0.27□□□□□ -2.45
SSSCA1O60232 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.27□□□□□ -2.45
SSSCA1O60232 AL390237.1-201ENST00000404226 1415 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 MIR1305-201ENST00000408300 86 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.28□□□□□ -2.45
SSSCA1O60232 MTCO3P10-201ENST00000455912 772 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 AL163973.1-201ENST00000484753 577 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 SUMO2P5-201ENST00000506790 245 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
SSSCA1O60232 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 AP002001.1-203ENST00000534002 267 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 MIR1273G-201ENST00000577677 100 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 AL390123.1-201ENST00000603216 237 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 MIR98-201ENST00000606724 119 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 RMST_2.1-201ENST00000617263 136 ntBASIC-0.28□□□□□ -2.45
SSSCA1O60232 RNA5SP128-201ENST00000365305 116 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 SNORD105-201ENST00000386910 85 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 MRPS36P1-201ENST00000421291 307 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 MTCYBP10-201ENST00000424905 650 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 AC007969.2-201ENST00000441891 191 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 AL606517.2-201ENST00000442855 241 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 AL139824.2-201ENST00000458731 1095 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 OR9P1P-201ENST00000496431 281 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 LRRC34P2-201ENST00000514850 553 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 SCARNA8-201ENST00000515924 131 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 AC115990.1-201ENST00000526957 301 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.29□□□□□ -2.46
SSSCA1O60232 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 MIR4778-201ENST00000577635 80 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 AC011712.1-201ENST00000588959 234 ntBASIC-0.29□□□□□ -2.46
SSSCA1O60232 AC012507.3-201ENST00000603556 477 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms