Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL590808.1-201ENST00000618696 141 ntBASIC2.23□□□□□ -2.05
SSX4O60224 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SSX4O60224 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.22□□□□□ -2.05
SSX4O60224 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
SSX4O60224 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SSX4O60224 SNORA25B-201ENST00000365507 128 ntBASIC2.22□□□□□ -2.05
SSX4O60224 XGY1-201ENST00000381172 446 ntBASIC2.22□□□□□ -2.05
SSX4O60224 RNU6-546P-201ENST00000383991 107 ntBASIC2.22□□□□□ -2.05
SSX4O60224 MIR524-201ENST00000385242 87 ntBASIC2.22□□□□□ -2.05
SSX4O60224 RNA5SP494-201ENST00000410653 129 ntBASIC2.22□□□□□ -2.05
SSX4O60224 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
SSX4O60224 AL353705.4-201ENST00000449661 238 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AF186996.7-201ENST00000492781 209 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AC091951.2-201ENST00000500762 203 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AC005741.1-201ENST00000511094 432 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AC026782.1-201ENST00000512952 449 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.22□□□□□ -2.05
SSX4O60224 RNU6-1016P-201ENST00000516689 94 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.22□□□□□ -2.05
SSX4O60224 SNORD53-201ENST00000579969 78 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AC018462.2-201ENST00000605375 395 ntBASIC2.22□□□□□ -2.05
SSX4O60224 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.22□□□□□ -2.05
SSX4O60224 AC064859.1-201ENST00000624741 174 ntBASIC2.22□□□□□ -2.05
SSX4O60224 MTND5P9-201ENST00000503854 1755 ntBASIC2.22□□□□□ -2.05
SSX4O60224 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
SSX4O60224 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SSX4O60224 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SSX4O60224 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SSX4O60224 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.06
SSX4O60224 Y_RNA.142-201ENST00000363491 102 ntBASIC2.21□□□□□ -2.06
SSX4O60224 SNORD32B-201ENST00000364460 84 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RNU6-596P-201ENST00000365395 98 ntBASIC2.21□□□□□ -2.06
SSX4O60224 SNORA70B-201ENST00000384210 135 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RNU6-842P-201ENST00000384269 107 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RNU6-601P-201ENST00000384540 107 ntBASIC2.21□□□□□ -2.06
SSX4O60224 MIR208B-201ENST00000401172 77 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RNU6-174P-201ENST00000410406 106 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RNU2-48P-201ENST00000410694 191 ntBASIC2.21□□□□□ -2.06
SSX4O60224 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.21□□□□□ -2.06
SSX4O60224 EIF4EP2-201ENST00000422816 654 ntBASIC2.21□□□□□ -2.06
SSX4O60224 CBX3P6-201ENST00000430257 527 ntBASIC2.21□□□□□ -2.06
SSX4O60224 IFNA11P-201ENST00000446352 526 ntBASIC2.21□□□□□ -2.06
SSX4O60224 AL139109.1-201ENST00000455491 297 ntBASIC2.21□□□□□ -2.06
SSX4O60224 RPL23AP75-201ENST00000491601 451 ntBASIC2.21□□□□□ -2.06
SSX4O60224 ANXA2P1-201ENST00000505539 926 ntBASIC2.21□□□□□ -2.06
SSX4O60224 HSPE1P18-201ENST00000517602 280 ntBASIC2.21□□□□□ -2.06
SSX4O60224 AC022616.8-201ENST00000533569 253 ntBASIC2.21□□□□□ -2.06
SSX4O60224 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.21□□□□□ -2.06
SSX4O60224 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.21□□□□□ -2.06
SSX4O60224 AC109446.1-201ENST00000566172 220 ntBASIC2.21□□□□□ -2.06
SSX4O60224 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.21□□□□□ -2.06
SSX4O60224 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.21□□□□□ -2.06
SSX4O60224 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
SSX4O60224 MIR4273-201ENST00000582824 84 ntBASIC2.21□□□□□ -2.06
SSX4O60224 AC011494.1-201ENST00000596454 237 ntBASIC2.21□□□□□ -2.06
SSX4O60224 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.21□□□□□ -2.06
SSX4O60224 AC005520.5-201ENST00000613926 164 ntBASIC2.21□□□□□ -2.06
SSX4O60224 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
SSX4O60224 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
SSX4O60224 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SSX4O60224 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 U3.9-201ENST00000363823 204 ntBASIC2.2□□□□□ -2.06
SSX4O60224 RNU6-593P-201ENST00000364716 112 ntBASIC2.2□□□□□ -2.06
SSX4O60224 Y_RNA.482-201ENST00000384377 111 ntBASIC2.2□□□□□ -2.06
SSX4O60224 RNU4-14P-201ENST00000410858 122 ntBASIC2.2□□□□□ -2.06
SSX4O60224 NCOR1P3-201ENST00000420479 303 ntBASIC2.2□□□□□ -2.06
SSX4O60224 MTND4P18-201ENST00000447010 465 ntBASIC2.2□□□□□ -2.06
SSX4O60224 MTND5P20-201ENST00000448677 143 ntBASIC2.2□□□□□ -2.06
SSX4O60224 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.2□□□□□ -2.06
SSX4O60224 YWHAEP4-201ENST00000505390 198 ntBASIC2.2□□□□□ -2.06
SSX4O60224 SNORA4.4-201ENST00000515921 135 ntBASIC2.2□□□□□ -2.06
SSX4O60224 MIR449C-201ENST00000516047 92 ntBASIC2.2□□□□□ -2.06
SSX4O60224 RNA5SP282-201ENST00000516355 108 ntBASIC2.2□□□□□ -2.06
SSX4O60224 RNA5SP24-201ENST00000516478 95 ntBASIC2.2□□□□□ -2.06
SSX4O60224 RNU6-667P-201ENST00000517186 102 ntBASIC2.2□□□□□ -2.06
SSX4O60224 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
SSX4O60224 AC105029.1-201ENST00000520250 669 ntBASIC2.2□□□□□ -2.06
SSX4O60224 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 CYCSP26-201ENST00000534107 320 ntBASIC2.2□□□□□ -2.06
SSX4O60224 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.2□□□□□ -2.06
SSX4O60224 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.2□□□□□ -2.06
SSX4O60224 MIR5092-201ENST00000583139 88 ntBASIC2.2□□□□□ -2.06
SSX4O60224 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
SSX4O60224 AC092794.2-201ENST00000620933 563 ntBASIC2.2□□□□□ -2.06
SSX4O60224 AL359757.2-201ENST00000624309 274 ntBASIC2.2□□□□□ -2.06
SSX4O60224 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.2□□□□□ -2.06
SSX4O60224 MTND4P12-201ENST00000498999 1377 ntBASIC2.2□□□□□ -2.06
SSX4O60224 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.2□□□□□ -2.06
SSX4O60224 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SSX4O60224 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SSX4O60224 U8.2-201ENST00000363156 134 ntBASIC2.19□□□□□ -2.06
SSX4O60224 RNU1-91P-201ENST00000364746 163 ntBASIC2.19□□□□□ -2.06
SSX4O60224 RNU6-1093P-201ENST00000391194 107 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms