Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 RNU1-143P-201ENST00000516296 146 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RNU6-56P-201ENST00000516986 93 ntBASIC3.02□□□□□ -1.93
PROM1O43490 MIR5680-201ENST00000577577 84 ntBASIC3.02□□□□□ -1.93
PROM1O43490 U1.23-201ENST00000610293 146 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RMST_6.1-201ENST00000611980 203 ntBASIC3.02□□□□□ -1.93
PROM1O43490 uc_338.25-201ENST00000613756 156 ntBASIC3.02□□□□□ -1.93
PROM1O43490 RNU1-68P-201ENST00000615382 146 ntBASIC3.02□□□□□ -1.93
PROM1O43490 AC078938.1-201ENST00000620993 318 ntBASIC3.02□□□□□ -1.93
PROM1O43490 U1.39-201ENST00000621562 146 ntBASIC3.02□□□□□ -1.93
PROM1O43490 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.02□□□□□ -1.93
PROM1O43490 MIR3529-201ENST00000637713 78 ntBASIC3.02□□□□□ -1.93
PROM1O43490 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PROM1O43490 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
PROM1O43490 MTND5P6-201ENST00000422338 1798 ntBASIC3.02□□□□□ -1.93
PROM1O43490 AC004944.1-201ENST00000517807 3059 ntBASIC3.01□□□□□ -1.93
PROM1O43490 RNU6-212P-201ENST00000362642 104 ntBASIC3.01□□□□□ -1.93
PROM1O43490 Y_RNA.143-201ENST00000363520 106 ntBASIC3.01□□□□□ -1.93
PROM1O43490 SNORD115-32-201ENST00000364079 82 ntBASIC3.01□□□□□ -1.93
PROM1O43490 Y_RNA.257-201ENST00000364596 102 ntBASIC3.01□□□□□ -1.93
PROM1O43490 RNU6-926P-201ENST00000384075 107 ntBASIC3.01□□□□□ -1.93
PROM1O43490 MT-TR-201ENST00000387439 65 ntBASIC3.01□□□□□ -1.93
PROM1O43490 MIR767-201ENST00000390228 109 ntBASIC3.01□□□□□ -1.93
PROM1O43490 RNU6-121P-201ENST00000410525 99 ntBASIC3.01□□□□□ -1.93
PROM1O43490 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
PROM1O43490 RNU4-47P-201ENST00000410876 114 ntBASIC3.01□□□□□ -1.93
PROM1O43490 RN7SKP58-201ENST00000411010 305 ntBASIC3.01□□□□□ -1.93
PROM1O43490 BMS1P22-201ENST00000414726 313 ntBASIC3.01□□□□□ -1.93
PROM1O43490 COTL1P1-201ENST00000422309 375 ntBASIC3.01□□□□□ -1.93
PROM1O43490 RPL23AP95-201ENST00000426806 265 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AC006028.1-201ENST00000438379 402 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AL161651.1-201ENST00000440882 223 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.01□□□□□ -1.93
PROM1O43490 RPL39P38-201ENST00000467018 153 ntBASIC3.01□□□□□ -1.93
PROM1O43490 S100A11P2-201ENST00000467589 312 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AP000870.1-201ENST00000472927 406 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AC016632.1-201ENST00000503994 196 ntBASIC3.01□□□□□ -1.93
PROM1O43490 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.01□□□□□ -1.93
PROM1O43490 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
PROM1O43490 Y_RNA.680-201ENST00000516441 93 ntBASIC3.01□□□□□ -1.93
PROM1O43490 Y_RNA.713-201ENST00000517013 96 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.01□□□□□ -1.93
PROM1O43490 MIR3128-201ENST00000581957 66 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AL356157.2-201ENST00000605122 111 ntBASIC3.01□□□□□ -1.93
PROM1O43490 Y_RNA.772-201ENST00000606692 102 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AL162274.2-201ENST00000614406 332 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AC011476.5-201ENST00000615594 130 ntBASIC3.01□□□□□ -1.93
PROM1O43490 MIR376A1-201ENST00000616574 68 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AC006386.2-201ENST00000624491 75 ntBASIC3.01□□□□□ -1.93
PROM1O43490 AC012005.1-201ENST00000624575 75 ntBASIC3.01□□□□□ -1.93
PROM1O43490 SNORA43.4-201ENST00000629559 138 ntBASIC3.01□□□□□ -1.93
PROM1O43490 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.01□□□□□ -1.93
PROM1O43490 RBBP8P1-201ENST00000449447 1844 ntBASIC3□□□□□ -1.93
PROM1O43490 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3□□□□□ -1.93
PROM1O43490 Y_RNA.14-201ENST00000362415 103 ntBASIC3□□□□□ -1.93
PROM1O43490 RNU6-1301P-201ENST00000362724 104 ntBASIC3□□□□□ -1.93
PROM1O43490 RNU6-1141P-201ENST00000364520 107 ntBASIC3□□□□□ -1.93
PROM1O43490 SNORA36A-201ENST00000384221 132 ntBASIC3□□□□□ -1.93
PROM1O43490 SNORD78.2-201ENST00000391076 69 ntBASIC3□□□□□ -1.93
PROM1O43490 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3□□□□□ -1.93
PROM1O43490 RPL32P35-201ENST00000415214 394 ntBASIC3□□□□□ -1.93
PROM1O43490 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3□□□□□ -1.93
PROM1O43490 RPL39P29-201ENST00000447779 157 ntBASIC3□□□□□ -1.93
PROM1O43490 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3□□□□□ -1.93
PROM1O43490 HMGB1P35-201ENST00000503360 598 ntBASIC3□□□□□ -1.93
PROM1O43490 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3□□□□□ -1.93
PROM1O43490 AC023824.2-201ENST00000566185 400 ntBASIC3□□□□□ -1.93
PROM1O43490 AL359198.2-201ENST00000611836 194 ntBASIC3□□□□□ -1.93
PROM1O43490 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PROM1O43490 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PROM1O43490 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3□□□□□ -1.93
PROM1O43490 AC093831.2-201ENST00000624393 3427 ntBASIC3□□□□□ -1.93
PROM1O43490 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PROM1O43490 Y_RNA.60-201ENST00000362831 98 ntBASIC2.99□□□□□ -1.93
PROM1O43490 SNORA20.1-201ENST00000364790 130 ntBASIC2.99□□□□□ -1.93
PROM1O43490 Y_RNA.552-201ENST00000384665 112 ntBASIC2.99□□□□□ -1.93
PROM1O43490 RNU2-20P-201ENST00000410425 191 ntBASIC2.99□□□□□ -1.93
PROM1O43490 RNU2-25P-201ENST00000411041 191 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AC096920.1-201ENST00000423991 241 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AL358075.3-201ENST00000426289 226 ntBASIC2.99□□□□□ -1.93
PROM1O43490 ARL5AP4-201ENST00000430731 512 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AL445305.1-201ENST00000432577 575 ntBASIC2.99□□□□□ -1.93
PROM1O43490 RPS15AP5-201ENST00000436276 388 ntBASIC2.99□□□□□ -1.93
PROM1O43490 RPS15AP7-201ENST00000439294 405 ntBASIC2.99□□□□□ -1.93
PROM1O43490 Z98949.2-201ENST00000440996 144 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.99□□□□□ -1.93
PROM1O43490 AC107626.1-201ENST00000471084 183 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AC109925.1-201ENST00000478069 331 ntBASIC2.99□□□□□ -1.93
PROM1O43490 SEM1P1-201ENST00000506694 209 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AC025465.3-201ENST00000510570 311 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.99□□□□□ -1.93
PROM1O43490 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
PROM1O43490 MIR4659A-201ENST00000580269 81 ntBASIC2.99□□□□□ -1.93
PROM1O43490 AC240442.1-201ENST00000616055 283 ntBASIC2.99□□□□□ -1.93
PROM1O43490 SDR42E1P4-201ENST00000620894 481 ntBASIC2.99□□□□□ -1.93
PROM1O43490 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
PROM1O43490 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
PROM1O43490 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PROM1O43490 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PROM1O43490 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
PROM1O43490 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms