Protein–RNA interactions for Protein: O43248

HOXC11, Homeobox protein Hox-C11, humanhuman

Predicted RBP Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11O43248 Y_RNA.279-201ENST00000364763 95 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.51□□□□□ -2.01
HOXC11O43248 snoU13.6-201ENST00000458785 104 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.51□□□□□ -2.01
HOXC11O43248 AL031274.2-201ENST00000599419 203 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 uc_338.5-201ENST00000611839 155 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 MIR6895-201ENST00000613497 78 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 AL132822.1-201ENST00000617063 513 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 AL133216.2-202ENST00000634512 349 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 AC099654.14-201ENST00000638599 341 ntBASIC2.51□□□□□ -2.01
HOXC11O43248 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HOXC11O43248 RNU5B-2P-201ENST00000363036 113 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 AL357139.1-201ENST00000407792 426 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 RN7SKP192-201ENST00000411291 327 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC11O43248 EIF4EP2-201ENST00000422816 654 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 PMCHL2-203ENST00000457791 237 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 MTND5P5-201ENST00000503764 376 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 AC116337.1-201ENST00000509680 687 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC11O43248 AC005741.1-201ENST00000511094 432 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.5□□□□□ -2.01
HOXC11O43248 MIR449C-201ENST00000516047 92 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 RNA5SP137-201ENST00000516833 135 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.5□□□□□ -2.01
HOXC11O43248 7SK.7-201ENST00000603504 247 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 MTND5P9-201ENST00000503854 1755 ntBASIC2.5□□□□□ -2.01
HOXC11O43248 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HOXC11O43248 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
HOXC11O43248 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HOXC11O43248 MIR548F5-201ENST00000408421 86 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 MIR1261-201ENST00000408659 82 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 RNU2-48P-201ENST00000410694 191 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC11O43248 AL135786.1-201ENST00000415892 214 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 AL121890.1-201ENST00000435457 205 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 MTND3P10-201ENST00000450967 341 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC11O43248 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC11O43248 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC11O43248 ANXA2P1-201ENST00000505539 926 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 AC090517.1-201ENST00000569307 266 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
HOXC11O43248 RPL17P51-201ENST00000605218 238 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 DUXAP9-208ENST00000622815 614 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.49□□□□□ -2.01
HOXC11O43248 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXC11O43248 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC11O43248 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXC11O43248 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HOXC11O43248 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HOXC11O43248 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HOXC11O43248 SNORD50.1-201ENST00000362987 71 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 RNU6-234P-201ENST00000365229 104 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 MIR548K-201ENST00000408406 116 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 SRIP3-201ENST00000413200 219 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 RPS3AP52-201ENST00000435639 297 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AC098614.3-201ENST00000438957 440 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 FTH1P25-201ENST00000447665 469 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 PRELID3BP1-201ENST00000457142 540 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AC087477.1-201ENST00000465747 340 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AC107032.1-201ENST00000485945 480 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.48□□□□□ -2.01
HOXC11O43248 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.48□□□□□ -2.01
HOXC11O43248 AC021269.2-201ENST00000532318 330 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.48□□□□□ -2.01
HOXC11O43248 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AC009994.1-201ENST00000606889 253 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AC009318.2-201ENST00000610917 651 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 AC012640.5-201ENST00000623897 319 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
HOXC11O43248 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC11O43248 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HOXC11O43248 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HOXC11O43248 Y_RNA.166-201ENST00000363730 102 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 RNU6-593P-201ENST00000364716 112 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 SNORA40.19-201ENST00000390846 128 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 RPL37P10-201ENST00000412884 288 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 AC138393.2-201ENST00000414742 246 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 Z98742.3-201ENST00000418637 326 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 NCOR1P3-201ENST00000420479 303 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC11O43248 AL356320.1-201ENST00000429616 163 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC11O43248 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC11O43248 RPL23AP75-201ENST00000491601 451 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.47□□□□□ -2.01
HOXC11O43248 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC11O43248 RNU5F-4P-201ENST00000516581 114 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 IGLV3-17-201ENST00000519099 244 ntBASIC2.47□□□□□ -2.01
HOXC11O43248 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.47□□□□□ -2.01
HOXC11O43248 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC11O43248 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.47□□□□□ -2.01
HOXC11O43248 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms