Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-216P-201ENST00000363282 104 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 RNU4-48P-201ENST00000365559 182 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 RNU6-166P-201ENST00000384371 107 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD1O14646 DPRXP1-201ENST00000426312 460 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.23□□□□□ -2.45
CHD1O14646 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 MIR4290-201ENST00000583807 95 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.23□□□□□ -2.45
CHD1O14646 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD1O14646 AC136475.10-201ENST00000620253 385 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.23□□□□□ -2.45
CHD1O14646 MIR198-201ENST00000637333 62 ntBASIC-0.23□□□□□ -2.45
CHD1O14646 SNORA32.1-201ENST00000364514 115 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 TPMTP2-201ENST00000414372 726 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.24□□□□□ -2.45
CHD1O14646 AC114981.1-201ENST00000503897 678 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AC109810.1-201ENST00000534066 224 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 RNU4-5P-201ENST00000607255 135 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AP001033.2-201ENST00000609701 1003 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AC008759.3-201ENST00000613300 508 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AL390237.1-201ENST00000404226 1415 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 RNU6-674P-201ENST00000363831 107 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AC091874.1-201ENST00000511402 339 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 RNU6-714P-201ENST00000516963 103 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AC069113.3-201ENST00000521019 150 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AC025678.1-201ENST00000567861 338 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 BNIP3P30-201ENST00000601184 574 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AL357080.1-201ENST00000617394 239 ntBASIC-0.24□□□□□ -2.45
CHD1O14646 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD1O14646 MIR653-201ENST00000385279 96 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 C1DP2-201ENST00000418167 426 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 MTND4LP11-201ENST00000422184 280 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 C1DP4-201ENST00000455429 424 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 RPL39P36-201ENST00000490784 156 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 AC093534.1-201ENST00000504977 132 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 SNORA25.12-201ENST00000516202 82 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CHD1O14646 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.25□□□□□ -2.45
CHD1O14646 AC008147.4-201ENST00000617570 1204 ntBASIC-0.25□□□□□ -2.45
CHD1O14646 SNORD116-20-201ENST00000384529 92 ntBASIC-0.26□□□□□ -2.45
CHD1O14646 SNORA16.2-201ENST00000390991 127 ntBASIC-0.26□□□□□ -2.45
CHD1O14646 AL606517.1-201ENST00000446914 387 ntBASIC-0.26□□□□□ -2.45
CHD1O14646 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.26□□□□□ -2.45
CHD1O14646 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.26□□□□□ -2.45
CHD1O14646 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.26□□□□□ -2.45
CHD1O14646 HMGB1P29-201ENST00000505659 499 ntBASIC-0.26□□□□□ -2.45
CHD1O14646 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.26□□□□□ -2.45
CHD1O14646 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.26□□□□□ -2.45
CHD1O14646 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.26□□□□□ -2.45
CHD1O14646 AC109446.1-201ENST00000566172 220 ntBASIC-0.26□□□□□ -2.45
CHD1O14646 RNU6-877P-201ENST00000383868 107 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 MIR520F-201ENST00000384824 87 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 RNU4-63P-201ENST00000411313 118 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 BX119904.4-201ENST00000424402 301 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 AC013262.1-201ENST00000426710 252 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD1O14646 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD1O14646 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD1O14646 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD1O14646 SNORA31.19-201ENST00000517079 126 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 IGKV1-22-201ENST00000524313 326 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
CHD1O14646 AL357312.1-201ENST00000603879 298 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD1O14646 MTND4P5-201ENST00000435821 1374 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 RNU6-97P-201ENST00000363387 104 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.27□□□□□ -2.45
CHD1O14646 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD1O14646 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.27□□□□□ -2.45
CHD1O14646 SNORA31.3-201ENST00000516029 96 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 TPRKBP2-201ENST00000565969 475 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 MIR4764-201ENST00000580680 88 ntBASIC-0.27□□□□□ -2.45
CHD1O14646 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.27□□□□□ -2.45
CHD1O14646 RNU6-212P-201ENST00000362642 104 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 SNORA25.3-201ENST00000363205 127 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 SNORA72.2-201ENST00000365028 127 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 MIR217-201ENST00000384817 110 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 RNA5SP496-201ENST00000391240 109 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 RNA5SP118-201ENST00000410385 109 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 AC104332.1-201ENST00000440471 797 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 SNRPEP8-201ENST00000442866 260 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 TMEM251P1-201ENST00000503717 318 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 SNRPGP1-201ENST00000553864 222 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 AC133794.1-201ENST00000602731 914 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 AL136317.1-201ENST00000612653 226 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC-0.28□□□□□ -2.45
CHD1O14646 AP000676.3-201ENST00000623299 569 ntBASIC-0.28□□□□□ -2.45
CHD1O14646 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.29□□□□□ -2.46
CHD1O14646 MTND4P25-201ENST00000441039 533 ntBASIC-0.29□□□□□ -2.46
CHD1O14646 RNU6-863P-201ENST00000515989 104 ntBASIC-0.29□□□□□ -2.46
CHD1O14646 SNORA76.2-201ENST00000517095 137 ntBASIC-0.29□□□□□ -2.46
CHD1O14646 AL353778.1-201ENST00000603149 408 ntBASIC-0.29□□□□□ -2.46
CHD1O14646 RMST_10.1-201ENST00000616309 154 ntBASIC-0.29□□□□□ -2.46
CHD1O14646 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.3□□□□□ -2.46
CHD1O14646 RNU6-278P-201ENST00000390945 109 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms