Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AP005597.4-201ENST00000526762 229 ntBASIC1.96□□□□□ -2.1
CDX4O14627 POLR3GP2-201ENST00000588366 668 ntBASIC1.96□□□□□ -2.1
CDX4O14627 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.96□□□□□ -2.1
CDX4O14627 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.96□□□□□ -2.1
CDX4O14627 ZNF271P-202ENST00000465539 1970 ntBASIC1.96□□□□□ -2.1
CDX4O14627 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CDX4O14627 MIR6073-201ENST00000352083 89 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-37P-201ENST00000362692 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-562P-201ENST00000362731 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-527P-201ENST00000363425 104 ntBASIC1.95□□□□□ -2.1
CDX4O14627 Y_RNA.135-201ENST00000363439 95 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-11P-201ENST00000364234 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNA5SP190-201ENST00000365222 118 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-25P-201ENST00000383873 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-1-201ENST00000383898 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 Y_RNA.419-201ENST00000384041 102 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-48P-201ENST00000384161 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-36P-201ENST00000384172 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-4P-201ENST00000384205 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-5P-201ENST00000384238 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-3P-201ENST00000384314 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-16P-201ENST00000384385 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-15P-201ENST00000384534 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-2-201ENST00000384627 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-29P-201ENST00000384637 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-9-201ENST00000384776 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-33P-201ENST00000384793 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 MIR499A-201ENST00000384903 122 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-1106P-201ENST00000390845 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNA5SP270-201ENST00000411361 118 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AC074085.1-201ENST00000413598 418 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AC074117.2-201ENST00000417130 397 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
CDX4O14627 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX4O14627 RPS3AP52-201ENST00000435639 297 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AL359672.1-201ENST00000442302 409 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AL139109.1-201ENST00000455491 297 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU7-138P-201ENST00000459479 64 ntBASIC1.95□□□□□ -2.1
CDX4O14627 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.95□□□□□ -2.1
CDX4O14627 RPS27P27-201ENST00000498779 255 ntBASIC1.95□□□□□ -2.1
CDX4O14627 MTND5P5-201ENST00000503764 376 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-377P-201ENST00000515965 102 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.95□□□□□ -2.1
CDX4O14627 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX4O14627 MIR3683-201ENST00000580847 82 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AC113139.1-201ENST00000605049 239 ntBASIC1.95□□□□□ -2.1
CDX4O14627 RNU6-6P-201ENST00000606623 107 ntBASIC1.95□□□□□ -2.1
CDX4O14627 AC007792.1-201ENST00000623023 402 ntBASIC1.95□□□□□ -2.1
CDX4O14627 U4.7-201ENST00000638126 106 ntBASIC1.95□□□□□ -2.1
CDX4O14627 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDX4O14627 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.95□□□□□ -2.1
CDX4O14627 Y_RNA.11-201ENST00000362375 109 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AL133475.1-201ENST00000404414 305 ntBASIC1.94□□□□□ -2.1
CDX4O14627 RNU2-63P-201ENST00000410792 194 ntBASIC1.94□□□□□ -2.1
CDX4O14627 RPL37P10-201ENST00000412884 288 ntBASIC1.94□□□□□ -2.1
CDX4O14627 CYCSP48-201ENST00000417124 323 ntBASIC1.94□□□□□ -2.1
CDX4O14627 NCOR1P3-201ENST00000420479 303 ntBASIC1.94□□□□□ -2.1
CDX4O14627 MTND4P28-201ENST00000426217 387 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX4O14627 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX4O14627 MTND1P17-201ENST00000448961 204 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC107399.1-201ENST00000451226 265 ntBASIC1.94□□□□□ -2.1
CDX4O14627 Y_RNA.632-201ENST00000459189 102 ntBASIC1.94□□□□□ -2.1
CDX4O14627 SNORD13-201ENST00000459299 104 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC130509.1-201ENST00000464158 433 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC104564.1-201ENST00000493028 407 ntBASIC1.94□□□□□ -2.1
CDX4O14627 MTCO1P29-201ENST00000496868 288 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC005840.1-201ENST00000498412 377 ntBASIC1.94□□□□□ -2.1
CDX4O14627 MTCYBP40-201ENST00000509390 1135 ntBASIC1.94□□□□□ -2.1
CDX4O14627 SNORA31.23-201ENST00000517219 133 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC104576.1-201ENST00000524225 88 ntBASIC1.94□□□□□ -2.1
CDX4O14627 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDX4O14627 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX4O14627 AC026371.1-201ENST00000551867 419 ntBASIC1.94□□□□□ -2.1
CDX4O14627 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX4O14627 FRG2DP-202ENST00000566967 323 ntBASIC1.94□□□□□ -2.1
CDX4O14627 MIR5571-201ENST00000577998 113 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC073410.2-201ENST00000603240 332 ntBASIC1.94□□□□□ -2.1
CDX4O14627 ELOCP5-201ENST00000604924 333 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AL121917.1-203ENST00000605534 577 ntBASIC1.94□□□□□ -2.1
CDX4O14627 AC064836.2-201ENST00000609491 462 ntBASIC1.94□□□□□ -2.1
CDX4O14627 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.94□□□□□ -2.1
CDX4O14627 AC024581.2-201ENST00000619986 252 ntBASIC1.94□□□□□ -2.1
CDX4O14627 MTND4LP32-201ENST00000636111 270 ntBASIC1.94□□□□□ -2.1
CDX4O14627 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX4O14627 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX4O14627 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CDX4O14627 SNORD56.1-201ENST00000362913 68 ntBASIC1.93□□□□□ -2.1
CDX4O14627 Y_RNA.796-201ENST00000364268 102 ntBASIC1.93□□□□□ -2.1
CDX4O14627 Y_RNA.799-201ENST00000364992 102 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNA5SP240-201ENST00000365355 128 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU6-1329P-201ENST00000365664 107 ntBASIC1.93□□□□□ -2.1
CDX4O14627 Y_RNA.384-201ENST00000383909 102 ntBASIC1.93□□□□□ -2.1
CDX4O14627 Y_RNA.387-201ENST00000383918 102 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU6-128P-201ENST00000383976 107 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU6-214P-201ENST00000384130 107 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU1-57P-201ENST00000384491 166 ntBASIC1.93□□□□□ -2.1
CDX4O14627 RNU6-95P-201ENST00000384697 107 ntBASIC1.93□□□□□ -2.1
CDX4O14627 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms