Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UPK2O00526 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK2O00526 DEFB131C-201ENST00000528817 165 ntBASIC0.96□□□□□ -2.26
UPK2O00526 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.96□□□□□ -2.26
UPK2O00526 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK2O00526 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK2O00526 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK2O00526 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK2O00526 AC023043.2-201ENST00000589678 1026 ntBASIC0.96□□□□□ -2.26
UPK2O00526 VN1R107P-201ENST00000601784 209 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AC234772.3-201ENST00000602277 528 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AP001836.1-201ENST00000604675 523 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AL365434.2-201ENST00000607979 234 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AL136370.1-201ENST00000608166 691 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AC008147.4-201ENST00000617570 1204 ntBASIC0.96□□□□□ -2.26
UPK2O00526 AF246928.1-201ENST00000623768 87 ntBASIC0.96□□□□□ -2.26
UPK2O00526 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK2O00526 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.96□□□□□ -2.26
UPK2O00526 MTND5P35-201ENST00000557537 1720 ntBASIC0.95□□□□□ -2.26
UPK2O00526 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
UPK2O00526 RNU4-48P-201ENST00000365559 182 ntBASIC0.95□□□□□ -2.26
UPK2O00526 RNU6-456P-201ENST00000384493 107 ntBASIC0.95□□□□□ -2.26
UPK2O00526 RNU6-297P-201ENST00000384636 107 ntBASIC0.95□□□□□ -2.26
UPK2O00526 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.95□□□□□ -2.26
UPK2O00526 BX295541.1-201ENST00000417774 250 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC010099.3-201ENST00000423896 409 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC002486.1-201ENST00000435098 391 ntBASIC0.95□□□□□ -2.26
UPK2O00526 snoU13.6-201ENST00000458785 104 ntBASIC0.95□□□□□ -2.26
UPK2O00526 snoU13.27-201ENST00000459278 104 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC008628.2-201ENST00000502605 298 ntBASIC0.95□□□□□ -2.26
UPK2O00526 LRRC34P2-201ENST00000514850 553 ntBASIC0.95□□□□□ -2.26
UPK2O00526 RNA5SP384-201ENST00000516615 116 ntBASIC0.95□□□□□ -2.26
UPK2O00526 RNA5SP481-201ENST00000516814 122 ntBASIC0.95□□□□□ -2.26
UPK2O00526 RRN3P3-201ENST00000549207 578 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK2O00526 AC011458.1-201ENST00000604034 617 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC064872.1-201ENST00000604823 1072 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AL356157.2-201ENST00000605122 111 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC009994.1-201ENST00000606889 253 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC006566.1-201ENST00000608943 513 ntBASIC0.95□□□□□ -2.26
UPK2O00526 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.95□□□□□ -2.26
UPK2O00526 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.95□□□□□ -2.26
UPK2O00526 AC009033.1-201ENST00000624279 431 ntBASIC0.95□□□□□ -2.26
UPK2O00526 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
UPK2O00526 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.94□□□□□ -2.26
UPK2O00526 RNU6-1097P-201ENST00000363586 107 ntBASIC0.94□□□□□ -2.26
UPK2O00526 SNORA33-201ENST00000363664 130 ntBASIC0.94□□□□□ -2.26
UPK2O00526 Y_RNA.255-201ENST00000364581 97 ntBASIC0.94□□□□□ -2.26
UPK2O00526 SNORA17.3-201ENST00000391159 129 ntBASIC0.94□□□□□ -2.26
UPK2O00526 RNU6-1093P-201ENST00000391194 107 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AL031577.2-201ENST00000404133 280 ntBASIC0.94□□□□□ -2.26
UPK2O00526 RNU4-62P-201ENST00000410125 130 ntBASIC0.94□□□□□ -2.26
UPK2O00526 RNU2-9P-201ENST00000410194 145 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK2O00526 MTCO1P21-201ENST00000416634 589 ntBASIC0.94□□□□□ -2.26
UPK2O00526 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK2O00526 EIF1P1-201ENST00000421436 341 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AL591704.2-201ENST00000421658 181 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK2O00526 CYCSP46-201ENST00000423569 204 ntBASIC0.94□□□□□ -2.26
UPK2O00526 MTCO3P29-201ENST00000432119 779 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AL033528.1-201ENST00000453780 140 ntBASIC0.94□□□□□ -2.26
UPK2O00526 C1DP4-201ENST00000455429 424 ntBASIC0.94□□□□□ -2.26
UPK2O00526 SNRPFP4-201ENST00000456366 242 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK2O00526 RNU6-856P-201ENST00000516959 98 ntBASIC0.94□□□□□ -2.26
UPK2O00526 RNU6-232P-201ENST00000517144 64 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AP003072.2-201ENST00000527756 676 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.94□□□□□ -2.26
UPK2O00526 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK2O00526 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK2O00526 AC008015.1-201ENST00000555505 465 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AC009094.1-201ENST00000564443 426 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AC109446.2-201ENST00000567872 497 ntBASIC0.94□□□□□ -2.26
UPK2O00526 MIR5583-1-201ENST00000580941 59 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AL050303.3-201ENST00000613704 284 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AP001506.1-201ENST00000615444 211 ntBASIC0.94□□□□□ -2.26
UPK2O00526 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
UPK2O00526 AC068787.1-201ENST00000623908 691 ntBASIC0.94□□□□□ -2.26
UPK2O00526 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.94□□□□□ -2.26
UPK2O00526 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
UPK2O00526 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
UPK2O00526 SNORA7.1-201ENST00000363750 139 ntBASIC0.93□□□□□ -2.26
UPK2O00526 RNU6-553P-201ENST00000364047 96 ntBASIC0.93□□□□□ -2.26
UPK2O00526 RNU4-91P-201ENST00000364778 135 ntBASIC0.93□□□□□ -2.26
UPK2O00526 RNU6-939P-201ENST00000384634 107 ntBASIC0.93□□□□□ -2.26
UPK2O00526 MIR194-1-201ENST00000384892 85 ntBASIC0.93□□□□□ -2.26
UPK2O00526 MIR764-201ENST00000390811 85 ntBASIC0.93□□□□□ -2.26
UPK2O00526 AL356776.1-201ENST00000406574 447 ntBASIC0.93□□□□□ -2.26
UPK2O00526 MIR1285-1-201ENST00000408593 84 ntBASIC0.93□□□□□ -2.26
UPK2O00526 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK2O00526 AC012306.1-201ENST00000423267 114 ntBASIC0.93□□□□□ -2.26
UPK2O00526 USP9YP14-201ENST00000430663 563 ntBASIC0.93□□□□□ -2.26
UPK2O00526 AC132479.1-201ENST00000449160 144 ntBASIC0.93□□□□□ -2.26
UPK2O00526 AC009474.2-201ENST00000451383 136 ntBASIC0.93□□□□□ -2.26
UPK2O00526 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
UPK2O00526 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK2O00526 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK2O00526 AC011406.1-201ENST00000512440 370 ntBASIC0.93□□□□□ -2.26
UPK2O00526 RNU7-40P-201ENST00000516397 64 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms