Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.25□□□□□ -2.45
HMGN4O00479 MTCYBP10-201ENST00000424905 650 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 AC010154.1-201ENST00000425857 269 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.25□□□□□ -2.45
HMGN4O00479 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.25□□□□□ -2.45
HMGN4O00479 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
HMGN4O00479 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.25□□□□□ -2.45
HMGN4O00479 AC109810.1-201ENST00000534066 224 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 MTND1P15-201ENST00000579262 949 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 AL390123.1-201ENST00000603216 237 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 AC008133.2-201ENST00000624540 351 ntBASIC-0.25□□□□□ -2.45
HMGN4O00479 AL079343.1-201ENST00000572358 1771 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC073544.1-201ENST00000600110 1595 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 RNU6-815P-201ENST00000384080 113 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AL590623.1-201ENST00000427864 105 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC073261.1-201ENST00000429409 121 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.26□□□□□ -2.45
HMGN4O00479 AC007969.2-201ENST00000441891 191 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 MTCO1P19-201ENST00000443487 500 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AL133217.1-201ENST00000450980 425 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 RNU7-14P-201ENST00000459331 62 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC022447.4-201ENST00000504053 364 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 HMGB1P29-201ENST00000505659 499 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.26□□□□□ -2.45
HMGN4O00479 MTND3P5-201ENST00000512798 333 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 SNORA31.10-201ENST00000516482 106 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.26□□□□□ -2.45
HMGN4O00479 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.26□□□□□ -2.45
HMGN4O00479 RPL21P136-201ENST00000605378 396 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC078938.1-201ENST00000620993 318 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AL078595.3-201ENST00000623815 1166 ntBASIC-0.26□□□□□ -2.45
HMGN4O00479 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.26□□□□□ -2.45
HMGN4O00479 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
HMGN4O00479 MIR412-201ENST00000362142 91 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 SNORA33-201ENST00000363664 130 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 RNU6-481P-201ENST00000384194 107 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 MIR520F-201ENST00000384824 87 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 SNORD65.1-201ENST00000390889 71 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AL603865.2-201ENST00000401679 213 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 MTCO2P34-201ENST00000421994 607 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.27□□□□□ -2.45
HMGN4O00479 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.27□□□□□ -2.45
HMGN4O00479 AC021231.3-201ENST00000558497 370 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AC023827.1-201ENST00000569247 97 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 MIR1273G-201ENST00000577677 100 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AC004223.2-201ENST00000590309 544 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AL391903.3-201ENST00000612158 163 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 MIR8087-201ENST00000612745 78 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AC112204.3-201ENST00000623822 332 ntBASIC-0.27□□□□□ -2.45
HMGN4O00479 AL390237.1-201ENST00000404226 1415 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 RNU6-302P-201ENST00000365249 107 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 RNU6-877P-201ENST00000383868 107 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 MIR10A-201ENST00000385043 110 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 MIR660-201ENST00000385235 97 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 SNORD105-201ENST00000386910 85 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 RNA5SP323-201ENST00000391094 133 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 MTCYBP2-201ENST00000407745 171 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 MIR1305-201ENST00000408300 86 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 RN7SKP200-201ENST00000410564 320 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC-0.28□□□□□ -2.45
HMGN4O00479 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.28□□□□□ -2.45
HMGN4O00479 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 RPL37P21-201ENST00000435890 276 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 MTCYBP39-201ENST00000437562 491 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 HMGN2P34-201ENST00000437647 269 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.28□□□□□ -2.45
HMGN4O00479 OR9P1P-201ENST00000496431 281 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 Y_RNA.687-201ENST00000516558 91 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.28□□□□□ -2.45
HMGN4O00479 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.28□□□□□ -2.45
HMGN4O00479 AP002001.1-203ENST00000534002 267 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 AC109446.1-201ENST00000566172 220 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 AL138889.2-201ENST00000603883 242 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 AC100814.1-201ENST00000606963 623 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 AC022893.3-201ENST00000607665 437 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 AL354696.1-201ENST00000614652 497 ntBASIC-0.28□□□□□ -2.45
HMGN4O00479 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.28□□□□□ -2.45
HMGN4O00479 RNU6-199P-201ENST00000362954 107 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 RNU6-142P-201ENST00000384019 107 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 RNU6V-201ENST00000384105 107 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 MIR489-201ENST00000384923 84 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 MIR518A1-201ENST00000385068 85 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
HMGN4O00479 MIR1197-201ENST00000408818 88 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.29□□□□□ -2.46
HMGN4O00479 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 AC108729.2-201ENST00000476543 840 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 SUMO2P5-201ENST00000506790 245 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
HMGN4O00479 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
HMGN4O00479 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.29□□□□□ -2.46
HMGN4O00479 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms