Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR6128-201ENST00000615528 109 ntBASIC2.2□□□□□ -2.06
O00370 MIR219B-201ENST00000637023 88 ntBASIC2.2□□□□□ -2.06
O00370 AC099654.14-201ENST00000638599 341 ntBASIC2.2□□□□□ -2.06
O00370 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
O00370 RNU6-227P-201ENST00000362865 103 ntBASIC2.19□□□□□ -2.06
O00370 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
O00370 MIR548F5-201ENST00000408421 86 ntBASIC2.19□□□□□ -2.06
O00370 MTND3P8-201ENST00000412909 339 ntBASIC2.19□□□□□ -2.06
O00370 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.19□□□□□ -2.06
O00370 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.19□□□□□ -2.06
O00370 AL353752.1-201ENST00000454946 260 ntBASIC2.19□□□□□ -2.06
O00370 MTND1P11-201ENST00000456661 876 ntBASIC2.19□□□□□ -2.06
O00370 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.19□□□□□ -2.06
O00370 PMCHL2-203ENST00000457791 237 ntBASIC2.19□□□□□ -2.06
O00370 snoU13.26-201ENST00000459452 105 ntBASIC2.19□□□□□ -2.06
O00370 RNU6-329P-201ENST00000459618 107 ntBASIC2.19□□□□□ -2.06
O00370 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
O00370 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.19□□□□□ -2.06
O00370 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.19□□□□□ -2.06
O00370 AC116353.2-201ENST00000505332 712 ntBASIC2.19□□□□□ -2.06
O00370 RNU5F-2P-201ENST00000516066 82 ntBASIC2.19□□□□□ -2.06
O00370 RNU6-566P-201ENST00000516790 107 ntBASIC2.19□□□□□ -2.06
O00370 RNU7-30P-201ENST00000516835 62 ntBASIC2.19□□□□□ -2.06
O00370 RNA5SP454-201ENST00000517231 127 ntBASIC2.19□□□□□ -2.06
O00370 AC109329.1-201ENST00000518744 317 ntBASIC2.19□□□□□ -2.06
O00370 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.19□□□□□ -2.06
O00370 AC115990.1-201ENST00000526957 301 ntBASIC2.19□□□□□ -2.06
O00370 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.19□□□□□ -2.06
O00370 MIR4529-201ENST00000578110 78 ntBASIC2.19□□□□□ -2.06
O00370 MIR4287-201ENST00000579398 78 ntBASIC2.19□□□□□ -2.06
O00370 AC005730.3-201ENST00000583067 366 ntBASIC2.19□□□□□ -2.06
O00370 POLR3GP2-201ENST00000588366 668 ntBASIC2.19□□□□□ -2.06
O00370 AC078899.2-201ENST00000595282 212 ntBASIC2.19□□□□□ -2.06
O00370 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.19□□□□□ -2.06
O00370 AL034555.1-201ENST00000604816 211 ntBASIC2.19□□□□□ -2.06
O00370 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.19□□□□□ -2.06
O00370 AC022202.1-201ENST00000613515 211 ntBASIC2.19□□□□□ -2.06
O00370 AC008121.3-201ENST00000618726 433 ntBASIC2.19□□□□□ -2.06
O00370 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
O00370 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.19□□□□□ -2.06
O00370 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
O00370 Y_RNA.135-201ENST00000363439 95 ntBASIC2.18□□□□□ -2.06
O00370 SNORD32A-201ENST00000364805 84 ntBASIC2.18□□□□□ -2.06
O00370 RNU6-1274P-201ENST00000384557 107 ntBASIC2.18□□□□□ -2.06
O00370 MIR561-201ENST00000385216 97 ntBASIC2.18□□□□□ -2.06
O00370 AP000275.1-201ENST00000411943 390 ntBASIC2.18□□□□□ -2.06
O00370 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.18□□□□□ -2.06
O00370 RPL30P1-201ENST00000488676 339 ntBASIC2.18□□□□□ -2.06
O00370 AC114801.2-201ENST00000503825 781 ntBASIC2.18□□□□□ -2.06
O00370 AC016632.1-201ENST00000503994 196 ntBASIC2.18□□□□□ -2.06
O00370 RNU1-54P-201ENST00000517181 120 ntBASIC2.18□□□□□ -2.06
O00370 RNU2-19P-201ENST00000517288 84 ntBASIC2.18□□□□□ -2.06
O00370 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.18□□□□□ -2.06
O00370 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.18□□□□□ -2.06
O00370 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.18□□□□□ -2.06
O00370 MIR4648-201ENST00000580107 72 ntBASIC2.18□□□□□ -2.06
O00370 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
O00370 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
O00370 AL031274.2-201ENST00000599419 203 ntBASIC2.18□□□□□ -2.06
O00370 VN1R107P-201ENST00000601784 209 ntBASIC2.18□□□□□ -2.06
O00370 SNRPGP19-201ENST00000603826 189 ntBASIC2.18□□□□□ -2.06
O00370 RNU4-56P-201ENST00000364700 142 ntBASIC2.17□□□□□ -2.06
O00370 AL079342.1-201ENST00000401460 267 ntBASIC2.17□□□□□ -2.06
O00370 AL591034.2-201ENST00000402839 359 ntBASIC2.17□□□□□ -2.06
O00370 RNU2-2P-201ENST00000410396 191 ntBASIC2.17□□□□□ -2.06
O00370 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.17□□□□□ -2.06
O00370 AC098614.3-201ENST00000438957 440 ntBASIC2.17□□□□□ -2.06
O00370 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.17□□□□□ -2.06
O00370 AL353572.1-201ENST00000442490 417 ntBASIC2.17□□□□□ -2.06
O00370 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.17□□□□□ -2.06
O00370 MTND4P17-201ENST00000470444 350 ntBASIC2.17□□□□□ -2.06
O00370 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.17□□□□□ -2.06
O00370 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.17□□□□□ -2.06
O00370 AC103851.1-201ENST00000506833 274 ntBASIC2.17□□□□□ -2.06
O00370 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.17□□□□□ -2.06
O00370 RNU6-965P-201ENST00000516721 96 ntBASIC2.17□□□□□ -2.06
O00370 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
O00370 U2.15-201ENST00000611544 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.16-201ENST00000613119 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.12-201ENST00000613778 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.20-201ENST00000613956 192 ntBASIC2.17□□□□□ -2.06
O00370 U2.9-201ENST00000615427 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.11-201ENST00000616345 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.2-201ENST00000616535 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.3-201ENST00000617785 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.19-201ENST00000618602 191 ntBASIC2.17□□□□□ -2.06
O00370 RNU2-1-201ENST00000618664 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.6-201ENST00000619225 191 ntBASIC2.17□□□□□ -2.06
O00370 U2.5-201ENST00000619465 191 ntBASIC2.17□□□□□ -2.06
O00370 AL159153.1-201ENST00000619688 317 ntBASIC2.17□□□□□ -2.06
O00370 U2.10-201ENST00000620268 191 ntBASIC2.17□□□□□ -2.06
O00370 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.17□□□□□ -2.06
O00370 DUXAP9-208ENST00000622815 614 ntBASIC2.17□□□□□ -2.06
O00370 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
O00370 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
O00370 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
O00370 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
O00370 RNU6-1285P-201ENST00000363480 105 ntBASIC2.16□□□□□ -2.06
O00370 Y_RNA.184-201ENST00000363884 108 ntBASIC2.16□□□□□ -2.06
O00370 RNU6-743P-201ENST00000364151 106 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms