Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 LRRC34P2-201ENST00000514850 553 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU6-1053P-201ENST00000515930 101 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNU2-69P-201ENST00000516061 100 ntBASIC1.1□□□□□ -2.23
DFFAO00273 RNA5SP481-201ENST00000516814 122 ntBASIC1.1□□□□□ -2.23
DFFAO00273 SNORA25.17-201ENST00000517184 124 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC106038.2-201ENST00000520706 568 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.1□□□□□ -2.23
DFFAO00273 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.1□□□□□ -2.23
DFFAO00273 AC090616.2-202ENST00000584248 222 ntBASIC1.1□□□□□ -2.23
DFFAO00273 Z98751.3-201ENST00000604447 521 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AL078604.3-201ENST00000615580 211 ntBASIC1.1□□□□□ -2.23
DFFAO00273 uc_338.11-201ENST00000619132 160 ntBASIC1.1□□□□□ -2.23
DFFAO00273 AC068787.1-201ENST00000623908 691 ntBASIC1.1□□□□□ -2.23
DFFAO00273 SNORD33-201ENST00000362761 85 ntBASIC1.09□□□□□ -2.23
DFFAO00273 SNORA63D-201ENST00000364359 132 ntBASIC1.09□□□□□ -2.23
DFFAO00273 RNU6-1019P-201ENST00000364424 107 ntBASIC1.09□□□□□ -2.23
DFFAO00273 RNU6-434P-201ENST00000384376 107 ntBASIC1.09□□□□□ -2.23
DFFAO00273 RNU6-321P-201ENST00000410912 106 ntBASIC1.09□□□□□ -2.23
DFFAO00273 AL161935.2-201ENST00000414627 60 ntBASIC1.09□□□□□ -2.23
DFFAO00273 SNRPEP10-201ENST00000420249 274 ntBASIC1.09□□□□□ -2.23
DFFAO00273 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.09□□□□□ -2.23
DFFAO00273 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.09□□□□□ -2.23
DFFAO00273 AC007395.1-201ENST00000451333 677 ntBASIC1.09□□□□□ -2.23
DFFAO00273 COX6CP14-201ENST00000469580 174 ntBASIC1.09□□□□□ -2.23
DFFAO00273 HMGN2P9-201ENST00000476875 229 ntBASIC1.09□□□□□ -2.23
DFFAO00273 RPL30P7-201ENST00000479312 323 ntBASIC1.09□□□□□ -2.23
DFFAO00273 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.09□□□□□ -2.23
DFFAO00273 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
DFFAO00273 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.09□□□□□ -2.23
DFFAO00273 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.09□□□□□ -2.23
DFFAO00273 AC103996.1-201ENST00000555468 102 ntBASIC1.09□□□□□ -2.23
DFFAO00273 AC021231.3-201ENST00000558497 370 ntBASIC1.09□□□□□ -2.23
DFFAO00273 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.09□□□□□ -2.23
DFFAO00273 CYP4A27P-201ENST00000567218 190 ntBASIC1.09□□□□□ -2.23
DFFAO00273 MIR4703-201ENST00000577728 79 ntBASIC1.09□□□□□ -2.23
DFFAO00273 RPL17P51-201ENST00000605218 238 ntBASIC1.09□□□□□ -2.23
DFFAO00273 MIR98-201ENST00000606724 119 ntBASIC1.09□□□□□ -2.23
DFFAO00273 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
DFFAO00273 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
DFFAO00273 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
DFFAO00273 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
DFFAO00273 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
DFFAO00273 RNU6-827P-201ENST00000365553 106 ntBASIC1.08□□□□□ -2.24
DFFAO00273 RNU6-1026P-201ENST00000384465 108 ntBASIC1.08□□□□□ -2.24
DFFAO00273 Y_RNA.560-201ENST00000384689 102 ntBASIC1.08□□□□□ -2.24
DFFAO00273 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
DFFAO00273 SNORA16.2-201ENST00000390991 127 ntBASIC1.08□□□□□ -2.24
DFFAO00273 SNORD70.1-201ENST00000391007 85 ntBASIC1.08□□□□□ -2.24
DFFAO00273 HMGN1P14-201ENST00000412459 517 ntBASIC1.08□□□□□ -2.24
DFFAO00273 ARL5AP1-201ENST00000418991 388 ntBASIC1.08□□□□□ -2.24
DFFAO00273 RPL31P35-201ENST00000431058 377 ntBASIC1.08□□□□□ -2.24
DFFAO00273 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.08□□□□□ -2.24
DFFAO00273 AL133217.1-201ENST00000450980 425 ntBASIC1.08□□□□□ -2.24
DFFAO00273 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
DFFAO00273 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.08□□□□□ -2.24
DFFAO00273 OR2A41P-201ENST00000473586 105 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC079140.5-201ENST00000507882 310 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AK3P2-201ENST00000507976 429 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC091874.1-201ENST00000511402 339 ntBASIC1.08□□□□□ -2.24
DFFAO00273 RNU6-567P-201ENST00000516746 107 ntBASIC1.08□□□□□ -2.24
DFFAO00273 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.08□□□□□ -2.24
DFFAO00273 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.08□□□□□ -2.24
DFFAO00273 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
DFFAO00273 AP003465.2-201ENST00000602571 373 ntBASIC1.08□□□□□ -2.24
DFFAO00273 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC002044.1-201ENST00000606707 158 ntBASIC1.08□□□□□ -2.24
DFFAO00273 MIR3976-201ENST00000606807 139 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC009994.1-201ENST00000606889 253 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC027449.1-201ENST00000608890 407 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC006566.1-201ENST00000608943 513 ntBASIC1.08□□□□□ -2.24
DFFAO00273 AC005520.5-201ENST00000613926 164 ntBASIC1.08□□□□□ -2.24
DFFAO00273 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
DFFAO00273 RNU1-96P-201ENST00000364163 162 ntBASIC1.07□□□□□ -2.24
DFFAO00273 RNU4-48P-201ENST00000365559 182 ntBASIC1.07□□□□□ -2.24
DFFAO00273 RNU6-1127P-201ENST00000384580 107 ntBASIC1.07□□□□□ -2.24
DFFAO00273 MIR513A1-201ENST00000385138 129 ntBASIC1.07□□□□□ -2.24
DFFAO00273 MRPL35P1-201ENST00000404272 572 ntBASIC1.07□□□□□ -2.24
DFFAO00273 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.07□□□□□ -2.24
DFFAO00273 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.07□□□□□ -2.24
DFFAO00273 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.07□□□□□ -2.24
DFFAO00273 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.07□□□□□ -2.24
DFFAO00273 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.07□□□□□ -2.24
DFFAO00273 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.07□□□□□ -2.24
DFFAO00273 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.07□□□□□ -2.24
DFFAO00273 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
DFFAO00273 AC009094.1-201ENST00000564443 426 ntBASIC1.07□□□□□ -2.24
DFFAO00273 AC090517.1-201ENST00000569307 266 ntBASIC1.07□□□□□ -2.24
DFFAO00273 AP005136.1-201ENST00000579765 429 ntBASIC1.07□□□□□ -2.24
DFFAO00273 MIR3937-201ENST00000580135 106 ntBASIC1.07□□□□□ -2.24
DFFAO00273 RSL24D1P11-201ENST00000591045 491 ntBASIC1.07□□□□□ -2.24
DFFAO00273 AC234772.3-201ENST00000602277 528 ntBASIC1.07□□□□□ -2.24
DFFAO00273 AP001836.1-201ENST00000604675 523 ntBASIC1.07□□□□□ -2.24
DFFAO00273 Z84480.1-201ENST00000605131 311 ntBASIC1.07□□□□□ -2.24
DFFAO00273 BNIP3P10-201ENST00000605360 577 ntBASIC1.07□□□□□ -2.24
DFFAO00273 CTHRC1P1-201ENST00000605383 469 ntBASIC1.07□□□□□ -2.24
DFFAO00273 AP001506.1-201ENST00000615444 211 ntBASIC1.07□□□□□ -2.24
DFFAO00273 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.07□□□□□ -2.24
DFFAO00273 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
DFFAO00273 RNU6-266P-201ENST00000364225 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms