Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 U4.6-201ENST00000621618 127 ntBASIC2.79□□□□□ -1.96
CGB1A6NKQ9 AC006001.4-201ENST00000622243 395 ntBASIC2.79□□□□□ -1.96
CGB1A6NKQ9 AC002064.3-201ENST00000623448 346 ntBASIC2.79□□□□□ -1.96
CGB1A6NKQ9 SNORA43.4-201ENST00000629559 138 ntBASIC2.79□□□□□ -1.96
CGB1A6NKQ9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.79□□□□□ -1.96
CGB1A6NKQ9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CGB1A6NKQ9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CGB1A6NKQ9 AC010889.1-201ENST00000566193 2666 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 RNU5F-3P-201ENST00000363767 117 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 SNORD115-8-201ENST00000363856 82 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 RNU6-704P-201ENST00000364162 103 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 Y_RNA.304-201ENST00000365011 112 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 SNORD115-38-201ENST00000365037 82 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 Y_RNA.331-201ENST00000365267 102 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 SNORD50.2-201ENST00000365465 70 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 Y_RNA.418-201ENST00000384029 102 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 Y_RNA.446-201ENST00000384178 104 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 RNU6-1289P-201ENST00000384431 106 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 MIR329-1-201ENST00000385028 80 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 RNU6-651P-201ENST00000411040 105 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC074117.2-201ENST00000417130 397 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 GPM6BP3-201ENST00000442797 145 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AL357552.1-201ENST00000445254 415 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC125238.1-201ENST00000448842 249 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AP001324.2-201ENST00000461163 319 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AP001025.1-201ENST00000486139 332 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 SNORA40.9-201ENST00000515895 93 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 RNU7-200P-201ENST00000516105 62 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 MIR2276-201ENST00000516886 89 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 RNU6-58P-201ENST00000517143 103 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 VN1R85P-201ENST00000601587 426 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC073349.3-201ENST00000617616 186 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AP003355.3-201ENST00000623465 114 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC138915.1-201ENST00000565427 1685 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CGB1A6NKQ9 FAM35CP-201ENST00000554755 2470 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AL359854.1-201ENST00000614203 1594 ntBASIC2.78□□□□□ -1.96
CGB1A6NKQ9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AC007496.3-201ENST00000624987 3443 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RNA5SP197-201ENST00000363357 119 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RNU6-961P-201ENST00000363893 105 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RNU6-1141P-201ENST00000364520 107 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RNA5SP479-201ENST00000364858 117 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RNU1-100P-201ENST00000365255 165 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RNU6-918P-201ENST00000391219 106 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RNU2-49P-201ENST00000410666 184 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 RN7SKP51-201ENST00000410781 304 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AL035423.1-201ENST00000420331 213 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AL445584.1-201ENST00000431451 330 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 SNORD2.1-201ENST00000458762 69 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AC091179.1-201ENST00000461606 579 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AC021205.2-201ENST00000480069 347 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AP005660.1-201ENST00000522972 293 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 HSPE1P4-201ENST00000550617 308 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AC005176.2-201ENST00000596933 147 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AL391813.1-201ENST00000603098 260 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AP001485.1-201ENST00000604799 199 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 AL121772.2-201ENST00000614331 297 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 Z83843.1-201ENST00000604070 3685 ntBASIC2.77□□□□□ -1.97
CGB1A6NKQ9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CGB1A6NKQ9 MFSD8-233ENST00000641482 4860 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
CGB1A6NKQ9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.76□□□□□ -1.97
CGB1A6NKQ9 AL109809.4-201ENST00000603520 2185 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.76□□□□□ -1.97
CGB1A6NKQ9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.76□□□□□ -1.97
CGB1A6NKQ9 RNA5SP124-201ENST00000362739 110 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 Y_RNA.383-201ENST00000383855 97 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 Y_RNA.435-201ENST00000384095 112 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 MIR544A-201ENST00000384855 91 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 RN7SKP61-201ENST00000410642 295 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.76□□□□□ -1.97
CGB1A6NKQ9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.76□□□□□ -1.97
CGB1A6NKQ9 AL161651.1-201ENST00000440882 223 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 MRPS10P1-201ENST00000448483 130 ntBASIC2.76□□□□□ -1.97
CGB1A6NKQ9 SNRPGP7-201ENST00000469016 106 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms