Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 RNU7-175P-201ENST00000515915 61 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 RNU6-567P-201ENST00000516746 107 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 SNORD116.3-201ENST00000517176 78 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 AC004584.2-201ENST00000570407 410 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 MIR5571-201ENST00000577998 113 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 AC010620.2-201ENST00000600135 313 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 SCARNA4-201ENST00000629045 128 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 SNORD98-201ENST00000636377 67 ntBASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM43BA6NCK2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 Y_RNA.40-201ENST00000362645 93 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 RNU6-1210P-201ENST00000363775 107 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 Y_RNA.252-201ENST00000364556 101 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 SNORA46-201ENST00000384762 135 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MIR764-201ENST00000390811 85 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 RNA5SP494-201ENST00000410653 129 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AC092423.1-201ENST00000430165 186 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MTCYBP6-201ENST00000441810 138 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AL137792.2-201ENST00000443484 235 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 RPL30P1-201ENST00000488676 339 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 RN7SL633P-201ENST00000488974 297 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AC090096.1-201ENST00000489168 390 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 RPL23AP75-201ENST00000491601 451 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 RNU2-53P-201ENST00000516257 147 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MIR5701-3-201ENST00000578890 82 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MIR3171-201ENST00000584270 74 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MIR5701-1-201ENST00000585138 82 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AC023043.3-201ENST00000593113 385 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 RPL23AP88-201ENST00000605759 454 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MIR5701-2-201ENST00000615634 82 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AC137590.2-201ENST00000619709 240 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 CTSLP2-204ENST00000629029 392 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 MIR7157-201ENST00000635801 60 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AC010329.5-201ENST00000623497 2174 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 AC092593.1-201ENST00000515413 1815 ntBASIC2.98□□□□□ -1.93
TRIM43BA6NCK2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 SNORA68.1-201ENST00000364537 132 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 Y_RNA.314-201ENST00000365114 102 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 SNORA36A-201ENST00000384221 132 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 MIR625-201ENST00000385047 85 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AL035666.1-201ENST00000446195 348 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AC087477.1-201ENST00000465747 340 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AL121594.1-201ENST00000475906 575 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AC021146.2-201ENST00000504736 556 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 RNU5F-2P-201ENST00000516066 82 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 Y_RNA.706-201ENST00000516933 99 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 RNU7-4P-201ENST00000516961 62 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AC020661.2-201ENST00000560114 134 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 SNRPGP17-201ENST00000603780 214 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AL670379.2-201ENST00000604983 252 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AC100812.1-201ENST00000607622 580 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 AC007742.2-201ENST00000618226 398 ntBASIC2.97□□□□□ -1.93
TRIM43BA6NCK2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AL355596.1-201ENST00000565399 3996 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.5-201ENST00000362334 102 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 RNU6-308P-201ENST00000390957 107 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 RNU6-1156P-201ENST00000410365 100 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 RPL19P1-201ENST00000411635 428 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AIMP1P2-201ENST00000425294 312 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 IFNA11P-201ENST00000446352 526 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 snoU13.30-201ENST00000458951 104 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 HMGB1P35-201ENST00000503360 598 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC105758.1-201ENST00000506038 399 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 SNORA31.16-201ENST00000516773 139 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 RNU6-988P-201ENST00000519081 107 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC023442.1-201ENST00000531247 422 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 HSPE1P20-201ENST00000538133 289 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC015712.3-201ENST00000559380 164 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AC104581.2-201ENST00000572227 430 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 Z98751.3-201ENST00000604447 521 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AL034555.1-201ENST00000604816 211 ntBASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM43BA6NCK2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 RNU6-1159P-201ENST00000362933 107 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 RNU5B-2P-201ENST00000363036 113 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.202-201ENST00000364083 110 ntBASIC2.95□□□□□ -1.94
TRIM43BA6NCK2 Y_RNA.405-201ENST00000383979 100 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms