Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-960P-201ENST00000364056 120 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNU4-76P-201ENST00000364509 141 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 MIR936-201ENST00000401264 98 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AL034345.1-201ENST00000407768 123 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNA5SP222-201ENST00000411039 105 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AL590135.1-201ENST00000422215 156 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC019205.3-201ENST00000424573 156 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC243964.1-201ENST00000441814 261 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC016700.2-201ENST00000446011 156 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 MTND2P3-201ENST00000452458 470 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC015911.1-201ENST00000495111 156 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-1053P-201ENST00000515930 101 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC131055.1-201ENST00000584626 316 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 MIR548AC-201ENST00000585049 88 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC022217.4-201ENST00000604389 163 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC097065.2-201ENST00000608159 533 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AC078880.5-201ENST00000617845 421 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 AL513423.1-201ENST00000621695 132 ntBASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.02□□□□□ -2.41
TCRBV3S1A0A5B6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-545P-201ENST00000362681 104 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 RNU1-133P-201ENST00000364867 167 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 RPL23AP30-201ENST00000432419 501 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AL162725.1-201ENST00000435405 301 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AL360271.2-201ENST00000447710 161 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AC245047.8-201ENST00000456455 284 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 RNU6-917P-201ENST00000516294 104 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AP002453.2-201ENST00000533503 320 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 AP002802.2-201ENST00000605877 235 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 U6.108-201ENST00000637764 58 ntBASIC-0.03□□□□□ -2.41
TCRBV3S1A0A5B6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-527P-201ENST00000363425 104 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNY3P13-201ENST00000365542 102 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-43P-201ENST00000384302 107 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-378P-201ENST00000384324 107 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 MIR660-201ENST00000385235 97 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 MIR140-201ENST00000385282 100 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNA5SP219-201ENST00000390940 113 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNA5SP467-201ENST00000391274 118 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 CALM2P3-201ENST00000400429 449 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RPS20P2-201ENST00000402520 389 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU4-22P-201ENST00000411058 166 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AC007283.2-201ENST00000424739 197 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 HSFY7P-201ENST00000432672 318 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 HSFY8P-201ENST00000437934 318 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AL603825.1-201ENST00000438481 80 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AC022364.2-201ENST00000457963 554 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-405P-201ENST00000516637 110 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-467P-201ENST00000517027 110 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 MTND4LP26-201ENST00000518144 282 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AP002001.1-203ENST00000534002 267 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 MIR3923-201ENST00000579521 83 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 SNRPGP20-201ENST00000604477 205 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AL391903.3-201ENST00000612158 163 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 MIR8054-201ENST00000620877 86 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AP002782.1-201ENST00000623107 614 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 MIR924-201ENST00000638017 53 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 U4.7-201ENST00000638126 106 ntBASIC-0.04□□□□□ -2.42
TCRBV3S1A0A5B6 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 RNU6-177P-201ENST00000411257 104 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 ELOCP17-201ENST00000414751 326 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AC010975.2-201ENST00000427781 588 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AL117351.1-201ENST00000438864 766 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 RPS23P5-201ENST00000495419 428 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AC021146.8-201ENST00000507455 733 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AC024995.1-201ENST00000523014 93 ntBASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.05□□□□□ -2.42
TCRBV3S1A0A5B6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms