Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PMCHL2-203ENST00000457791 237 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL117351.2-201ENST00000513571 157 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 ACA59.1-201ENST00000515966 143 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 Y_RNA.682-201ENST00000516457 100 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 SNORA31.16-201ENST00000516773 139 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 SNORA20.3-201ENST00000516880 132 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC005668.1-201ENST00000571142 476 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR3945-201ENST00000581853 98 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 FGF7P1-201ENST00000582820 288 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 POLR3GP2-201ENST00000588366 668 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR3976-201ENST00000606807 139 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC013412.1-201ENST00000610687 192 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 SNORA43.4-201ENST00000629559 138 ntBASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
TRBV5-4A0A0C4DH59 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU4-15P-201ENST00000362613 141 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 Y_RNA.166-201ENST00000363730 102 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-784P-201ENST00000384330 106 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC009238.1-201ENST00000442165 424 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC009237.6-201ENST00000446969 424 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU7-30P-201ENST00000516835 62 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU1-54P-201ENST00000517181 120 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC118273.2-201ENST00000532092 465 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 RPS3AP23-202ENST00000574601 686 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL049779.4-201ENST00000604500 156 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC063943.3-201ENST00000615562 356 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC022306.2-201ENST00000617563 647 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL133216.2-202ENST00000634512 349 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL450472.1-202ENST00000637286 180 ntBASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 Y_RNA.390-201ENST00000383932 102 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 MTCYBP2-201ENST00000407745 171 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 RN7SKP158-201ENST00000410453 326 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 Y_RNA.597-201ENST00000410463 100 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC074085.1-201ENST00000413598 418 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 CBX3P6-201ENST00000430257 527 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC098614.3-201ENST00000438957 440 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC145146.1-201ENST00000496370 254 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 MTND5P5-201ENST00000503764 376 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC018630.3-201ENST00000542637 96 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 CYP4A27P-201ENST00000567218 190 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL078605.1-201ENST00000603529 500 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 Z98751.3-201ENST00000604447 521 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 uc_338.5-201ENST00000611839 155 ntBASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
TRBV5-4A0A0C4DH59 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 Z82209.1-201ENST00000422141 2135 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU1-23P-201ENST00000363361 144 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-1286P-201ENST00000383871 107 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-546P-201ENST00000383991 107 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 RNU6-968P-201ENST00000384076 107 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL591034.2-201ENST00000402839 359 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR548K-201ENST00000408406 116 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC012306.1-201ENST00000423267 114 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 Z82205.1-201ENST00000428456 297 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC107399.1-201ENST00000451226 265 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 MIR6128-201ENST00000615528 109 ntBASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.91□□□□□ -2.1
TRBV5-4A0A0C4DH59 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
TRBV5-4A0A0C4DH59 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU6-944P-201ENST00000364023 107 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORA25B-201ENST00000365507 128 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORA29-201ENST00000384183 140 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 SNORA36A-201ENST00000384221 132 ntBASIC1.9□□□□□ -2.11
TRBV5-4A0A0C4DH59 RNU6-306P-201ENST00000384617 107 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms