Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MTCYBP1-201ENST00000454315 1119 ntBASIC0.13□□□□□ -2.39
TRAV17A0A0B4J275 RNU7-34P-201ENST00000459394 64 ntBASIC0.13□□□□□ -2.39
TRAV17A0A0B4J275 AC007547.1-201ENST00000462177 490 ntBASIC0.13□□□□□ -2.39
TRAV17A0A0B4J275 Z83818.1-201ENST00000603584 150 ntBASIC0.13□□□□□ -2.39
TRAV17A0A0B4J275 PRELID3BP2-201ENST00000605362 201 ntBASIC0.13□□□□□ -2.39
TRAV17A0A0B4J275 AC092354.1-201ENST00000606057 376 ntBASIC0.13□□□□□ -2.39
TRAV17A0A0B4J275 AC116165.2-201ENST00000616705 206 ntBASIC0.13□□□□□ -2.39
TRAV17A0A0B4J275 CASC19-280ENST00000642102 1351 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 MIRLET7D-201ENST00000362263 87 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 SNORA72.2-201ENST00000365028 127 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 SNORD41-201ENST00000386967 70 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 RPL22P18-201ENST00000417197 377 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AL606662.1-201ENST00000445763 553 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 MTND2P3-201ENST00000452458 470 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 HMGN1P12-201ENST00000499125 195 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC113347.3-201ENST00000509113 148 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC011406.1-201ENST00000512440 370 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 Y_RNA.681-201ENST00000516445 113 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 RNU6-1098P-201ENST00000516772 96 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AL390123.1-201ENST00000603216 237 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC012507.3-201ENST00000603556 477 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC080078.2-201ENST00000603766 501 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC064872.1-201ENST00000604823 1072 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 AC104985.3-201ENST00000623479 597 ntBASIC0.12□□□□□ -2.39
TRAV17A0A0B4J275 MTND5P16-201ENST00000460269 1703 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 RNU6-511P-201ENST00000363496 107 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 MIR32-201ENST00000384965 70 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 MIR653-201ENST00000385279 96 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 SNORD99-201ENST00000408612 74 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 AL031779.1-201ENST00000415663 330 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 RPEP5-201ENST00000441137 268 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 HMGN1P10-201ENST00000474557 553 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 CYCTP-201ENST00000504253 315 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 RNU6-922P-201ENST00000516753 99 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 AC008752.3-201ENST00000588113 712 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 AL929325.1-201ENST00000603096 117 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
TRAV17A0A0B4J275 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 RNU6-78P-201ENST00000362897 107 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 RNU1-76P-201ENST00000362903 159 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 SNORA33-201ENST00000363664 130 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 RNU6-163P-201ENST00000384396 106 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 RNU6-1031P-201ENST00000384773 107 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 MIR544A-201ENST00000384855 91 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 SNORA75.2-201ENST00000391138 150 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 SNORA75.3-201ENST00000391231 150 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 C1DP2-201ENST00000418167 426 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 DAP3P1-201ENST00000441522 278 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 C1DP4-201ENST00000455429 424 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 RNU7-90P-201ENST00000459216 62 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 AL049830.1-201ENST00000468034 425 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 SNORA31.10-201ENST00000516482 106 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 AC110760.3-201ENST00000598794 467 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 AC010620.1-201ENST00000601088 1102 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 AL360219.1-201ENST00000610230 366 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 SNORD98-201ENST00000636377 67 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 AC103706.2-201ENST00000638080 240 ntBASIC0.1□□□□□ -2.39
TRAV17A0A0B4J275 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 RNU6-621P-201ENST00000364752 109 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 Y_RNA.280-201ENST00000364765 112 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 RNU6-1327P-201ENST00000365302 105 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 RNU5E-6P-201ENST00000365574 115 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 RNU6-946P-201ENST00000383878 107 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 RNU6-190P-201ENST00000384154 102 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 SNORD89-201ENST00000390981 114 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 UBE2D3P3-201ENST00000426992 425 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 RNU7-14P-201ENST00000459331 62 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 SRRM1P2-201ENST00000464531 1192 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 Y_RNA.689-201ENST00000516589 107 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 OR8K2P-201ENST00000524645 927 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 AC021231.3-201ENST00000558497 370 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 AC109446.1-201ENST00000566172 220 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 AC078880.5-201ENST00000617845 421 ntBASIC0.09□□□□□ -2.4
TRAV17A0A0B4J275 AC092268.1-201ENST00000342691 405 ntBASIC0.08□□□□□ -2.4
TRAV17A0A0B4J275 RNU6-960P-201ENST00000364056 120 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms