Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL133173.2-201ENST00000614270 90 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 SNORA43.4-201ENST00000629559 138 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 MTND5P17-201ENST00000418405 1603 ntBASIC0.74□□□□□ -2.29
TRAV41A0A0B4J266 MTND4P14-201ENST00000435799 1354 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1214P-201ENST00000363650 109 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU1-96P-201ENST00000364163 162 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNY1P12-201ENST00000364251 105 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-74P-201ENST00000384235 107 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-925P-201ENST00000384629 104 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 MIR222-201ENST00000384992 110 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AL356776.1-201ENST00000406574 447 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-195P-201ENST00000411352 109 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC060773.1-201ENST00000421698 310 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC078809.1-201ENST00000427601 140 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AL133396.1-201ENST00000432048 687 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC073614.1-201ENST00000438690 650 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 UBE2D3P4-201ENST00000441973 436 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC114982.1-201ENST00000469402 321 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AL163973.1-201ENST00000484753 577 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC079140.3-201ENST00000511111 550 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU5F-4P-201ENST00000516581 114 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-113P-201ENST00000516653 101 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 SNORA25.17-201ENST00000517184 124 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC109479.2-201ENST00000517842 174 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 DEFB131C-201ENST00000528817 165 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AP003461.1-201ENST00000528866 78 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AL512310.8-201ENST00000550183 120 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 EIF4A1P12-201ENST00000551910 141 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC103996.1-201ENST00000555468 102 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 MIR4775-201ENST00000581168 75 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC103810.9-201ENST00000606688 112 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AC004492.1-201ENST00000607036 742 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 AL365434.2-201ENST00000607979 234 ntBASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-552P-201ENST00000362869 119 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1287P-201ENST00000362914 107 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 SNORA33-201ENST00000363664 130 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 RNU5F-7P-201ENST00000363696 115 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 SNORA18.2-201ENST00000383865 132 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1060P-201ENST00000384664 107 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 MTCO1P21-201ENST00000416634 589 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 ARL5AP1-201ENST00000418991 388 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC011233.1-201ENST00000422812 283 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC091435.1-201ENST00000505442 584 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 ARL2BPP4-201ENST00000506854 471 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 MTCO3P7-201ENST00000510008 774 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 FABP5P5-201ENST00000515537 406 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 SNORD27.1-201ENST00000516319 72 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 Vault.3-201ENST00000516676 95 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-856P-201ENST00000516959 98 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC008015.1-201ENST00000555505 465 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 BNIP3P8-201ENST00000597863 560 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 VN1R107P-201ENST00000601784 209 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC002044.1-201ENST00000606707 158 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC009994.1-201ENST00000606889 253 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC008147.4-201ENST00000617570 1204 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC126177.8-201ENST00000618339 1015 ntBASIC0.72□□□□□ -2.29
TRAV41A0A0B4J266 AC092268.1-201ENST00000342691 405 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 RNU6-827P-201ENST00000365553 106 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 RNU6-877P-201ENST00000383868 107 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 SNORA16.2-201ENST00000390991 127 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 MTCO2P34-201ENST00000421994 607 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 SNX2P2-201ENST00000424553 323 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 USP9YP14-201ENST00000430663 563 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 HSFY7P-201ENST00000432672 318 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 HSFY8P-201ENST00000437934 318 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 AC073910.1-201ENST00000445047 438 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 AL031274.1-201ENST00000450334 232 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 AC007395.1-201ENST00000451333 677 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 RPS29P15-201ENST00000458329 171 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 RPL31P3-201ENST00000458430 332 ntBASIC0.71□□□□□ -2.3
TRAV41A0A0B4J266 snoU13.27-201ENST00000459278 104 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms