Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MTND5P10-201ENST00000603719 1809 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SNX9Q9Y5X1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.2-201ENST00000362330 96 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 RNA5SP289-201ENST00000362332 137 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 RNU6-1115P-201ENST00000362490 106 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 RNU6-227P-201ENST00000362865 103 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 SNORA41-201ENST00000384675 132 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AL591034.2-201ENST00000402839 359 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 MTND3P9-201ENST00000429526 346 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AL591043.1-201ENST00000432461 424 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AL137792.2-201ENST00000443484 235 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 U8.21-201ENST00000459536 136 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 RPL23AP49-201ENST00000492925 468 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 RN7SL636P-201ENST00000497504 294 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AC022447.4-201ENST00000504053 364 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 RNA5SP82-201ENST00000516707 92 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AC021269.2-201ENST00000532318 330 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 CYP2C61P-201ENST00000604072 290 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AC005014.2-201ENST00000607795 599 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 AC090971.5-201ENST00000621102 293 ntBASIC2.59□□□□□ -1.99
SNX9Q9Y5X1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
SNX9Q9Y5X1 RNU6-858P-201ENST00000362436 107 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 Y_RNA.31-201ENST00000362574 102 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 Y_RNA.48-201ENST00000362710 103 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 Y_RNA.128-201ENST00000363391 112 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RNU6-487P-201ENST00000365430 104 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RNU6-1040P-201ENST00000383974 107 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RNU6-784P-201ENST00000384330 106 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 MIR521-1-201ENST00000384902 87 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.58□□□□□ -2
SNX9Q9Y5X1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.58□□□□□ -2
SNX9Q9Y5X1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC091874.1-201ENST00000511402 339 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RNU6-470P-201ENST00000515954 104 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RNU1-104P-201ENST00000517280 175 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 CBX3P8-201ENST00000532412 525 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC023824.2-201ENST00000566185 400 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC060766.3-201ENST00000591442 263 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC046143.2-201ENST00000609789 160 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC091925.1-201ENST00000623204 462 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 MIR3529-201ENST00000637713 78 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.58□□□□□ -2
SNX9Q9Y5X1 AC004944.1-201ENST00000517807 3059 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.58□□□□□ -2
SNX9Q9Y5X1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SNX9Q9Y5X1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.57□□□□□ -2
SNX9Q9Y5X1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
SNX9Q9Y5X1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 Y_RNA.326-201ENST00000365176 113 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 Y_RNA.463-201ENST00000384271 102 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 RNU6-933P-201ENST00000384424 107 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 RNU6-19P-201ENST00000384718 107 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 MIR1302-11-201ENST00000408051 138 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 MIR1302-9-201ENST00000408365 138 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 MIR1302-10-201ENST00000408734 138 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 RNA5SP390-201ENST00000410191 113 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.57□□□□□ -2
SNX9Q9Y5X1 EIF4EP2-201ENST00000422816 654 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 PMCHL1-202ENST00000423102 261 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 PTGES3P4-201ENST00000426243 356 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 RPL23AP95-201ENST00000426806 265 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.57□□□□□ -2
SNX9Q9Y5X1 RNU7-26P-201ENST00000458980 63 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC090096.1-201ENST00000489168 390 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC026436.1-201ENST00000510537 270 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.57□□□□□ -2
SNX9Q9Y5X1 ACA59.1-201ENST00000515966 143 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.57□□□□□ -2
SNX9Q9Y5X1 MIR4435-1-201ENST00000582552 80 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 MIR4298-201ENST00000584380 73 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC022432.1-201ENST00000595739 310 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 MIR1302-2-201ENST00000607096 138 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC009318.2-201ENST00000610917 651 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
SNX9Q9Y5X1 AC080128.1-201ENST00000474389 1917 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 Y_RNA.533-201ENST00000384596 114 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 RNU6-748P-201ENST00000384648 107 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.56□□□□□ -2
SNX9Q9Y5X1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.56□□□□□ -2
SNX9Q9Y5X1 AC018865.2-201ENST00000423631 129 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
SNX9Q9Y5X1 MIR2053-201ENST00000459295 91 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms