Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC084781.2-201ENST00000615568 161 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU4-79P-201ENST00000362764 141 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-797P-201ENST00000363101 109 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU1-23P-201ENST00000363361 144 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORD116-29-201ENST00000384516 83 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 MTCYBP10-201ENST00000424905 650 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 AL353997.1-201ENST00000432936 108 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 RPL17P19-201ENST00000489069 552 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 AP000889.1-201ENST00000530968 660 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 AC010928.2-201ENST00000588017 287 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 C8orf59P2-201ENST00000603441 271 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 AC093010.3-201ENST00000570269 15214 ntBASIC3.21□□□□□ -1.9
COL4A3BPQ9Y5P4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU1-35P-201ENST00000362782 153 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-137P-201ENST00000363680 108 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-26P-201ENST00000383985 107 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-890P-201ENST00000384121 107 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORA12.2-201ENST00000391040 156 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-1304P-201ENST00000411374 106 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 AL451074.5-201ENST00000415894 435 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 Z82188.1-201ENST00000436709 154 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 AC103975.1-201ENST00000482506 483 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 AC068781.1-201ENST00000488231 618 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 RNA5SP54-201ENST00000516951 92 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 AC090517.1-201ENST00000569307 266 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 MIR5701-3-201ENST00000578890 82 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 MIR5701-1-201ENST00000585138 82 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 MIR5701-2-201ENST00000615634 82 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 MTND5P10-201ENST00000603719 1809 ntBASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
COL4A3BPQ9Y5P4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.58-201ENST00000362807 102 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.154-201ENST00000363624 102 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 RNY3P1-201ENST00000365085 102 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 RNY3-201ENST00000365484 102 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORA25B-201ENST00000365507 128 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORA18.3-201ENST00000384122 132 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORA12-201ENST00000391162 147 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 BMS1P22-201ENST00000414726 313 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 AC007098.1-201ENST00000420122 367 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 RPS29P6-201ENST00000438196 145 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU7-152P-201ENST00000458982 64 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 RNA5SP367-201ENST00000516557 118 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 AC090115.4-201ENST00000609970 188 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 AC092608.2-201ENST00000624427 218 ntBASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
COL4A3BPQ9Y5P4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.61-201ENST00000362835 102 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.319-201ENST00000365138 92 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.405-201ENST00000383979 100 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.451-201ENST00000384200 100 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-17P-201ENST00000384245 107 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 U8.10-201ENST00000384260 133 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-18P-201ENST00000384527 107 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.524-201ENST00000384564 100 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.561-201ENST00000384694 100 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-541P-201ENST00000384709 110 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 MIR512-1-201ENST00000384913 84 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 MTND3P23-201ENST00000431980 347 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 MTCO3P10-201ENST00000455912 772 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 AC007215.1-201ENST00000464893 276 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 MIR4658-201ENST00000584344 65 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 SNRPGP20-201ENST00000604477 205 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 AL627309.6-201ENST00000606857 840 ntBASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
COL4A3BPQ9Y5P4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.146-201ENST00000363549 102 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORD115-8-201ENST00000363856 82 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 Y_RNA.187-201ENST00000363918 113 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 SNORD115-38-201ENST00000365037 82 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU6-611P-201ENST00000384276 104 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.17□□□□□ -1.9
COL4A3BPQ9Y5P4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms