Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 Y_RNA.485-201ENST00000384395 102 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 CBX3P9-201ENST00000402326 552 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AL121594.1-201ENST00000475906 575 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AC008885.1-201ENST00000514930 301 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 SNORA74D-201ENST00000516404 141 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 RNU6-1198P-201ENST00000516904 67 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 CYP4A27P-201ENST00000567218 190 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 MIR5188-201ENST00000583467 113 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 U2.1-201ENST00000618978 145 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AL162373.1-201ENST00000620433 407 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 AC091953.5-201ENST00000622919 233 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 MIR3651-201ENST00000630427 90 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 MAPK10-266ENST00000641066 6555 ntBASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PCDHA3Q9Y5H8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AC010329.5-201ENST00000623497 2174 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 RNU6-486P-201ENST00000363116 107 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 RNU6-525P-201ENST00000363685 104 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 SNORD115-8-201ENST00000363856 82 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 RNY3P11-201ENST00000364153 102 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 SNORA68.1-201ENST00000364537 132 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 SNORD115-38-201ENST00000365037 82 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 RNA5SP344-201ENST00000411081 104 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 MTCO3P19-201ENST00000415864 321 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 EIF4EP4-201ENST00000424916 578 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AP000705.1-201ENST00000454567 350 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 RNU7-169P-201ENST00000459456 61 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 TOMM22P6-201ENST00000465035 409 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 Y_RNA.720-201ENST00000517166 92 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AC022616.4-201ENST00000522985 181 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 HSBP1P1-201ENST00000555205 166 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AC006600.1-201ENST00000572529 153 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AC090617.3-201ENST00000573670 475 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 MIR3923-201ENST00000579521 83 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AC103810.1-201ENST00000579873 453 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AC008737.2-201ENST00000599446 118 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AL034555.1-201ENST00000604816 211 ntBASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.05□□□□□ -1.92
PCDHA3Q9Y5H8 AC108206.1-201ENST00000570186 4159 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 Y_RNA.358-201ENST00000365491 99 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 SNORD14.1-201ENST00000365609 90 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 MIR1289-1-201ENST00000408836 144 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC113618.1-201ENST00000416747 285 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC114482.1-201ENST00000418010 247 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC096644.2-201ENST00000429278 159 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC104332.2-201ENST00000429959 156 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 RPS3P1-201ENST00000456781 192 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 MTND5P22-201ENST00000458380 195 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 RN7SL504P-201ENST00000494496 287 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 RNU2-53P-201ENST00000516257 147 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 RNU6-764P-201ENST00000516396 105 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 RN7SKP272-201ENST00000516988 232 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 RN7SKP57-201ENST00000517248 293 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AC136443.5-201ENST00000603741 370 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AL138963.2-201ENST00000605137 226 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 AL132822.1-201ENST00000617063 513 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 MIR6733-201ENST00000635723 61 ntBASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHA3Q9Y5H8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 SNORA71.1-201ENST00000364523 117 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 Y_RNA.424-201ENST00000384063 103 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 Y_RNA.455-201ENST00000384230 98 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 Y_RNA.526-201ENST00000384572 110 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 SNORD88.1-201ENST00000408684 91 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 RPL23AP70-201ENST00000483361 460 ntBASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHA3Q9Y5H8 AC027288.2-201ENST00000553028 243 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms