Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC009969.1-201ENST00000438726 172 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 RPS15AP7-201ENST00000439294 405 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 snoU13.6-201ENST00000458785 104 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU7-169P-201ENST00000459456 61 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 AC145146.1-201ENST00000496370 254 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 AC022616.4-201ENST00000522985 181 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 AC006600.1-201ENST00000572529 153 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 RPS29P30-201ENST00000600975 111 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 AC138305.3-201ENST00000624988 240 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 BX322639.1-202ENST00000423987 2213 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-159P-201ENST00000391080 106 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-101P-201ENST00000410323 104 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 AL357552.1-201ENST00000445254 415 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 AP000705.1-201ENST00000454567 350 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 AL353752.1-201ENST00000454946 260 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 AC112492.4-201ENST00000456549 352 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 CKS1BP2-201ENST00000497342 240 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 RNA5SP341-201ENST00000516261 117 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-1045P-201ENST00000516321 107 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 AC027288.2-201ENST00000553028 243 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR6852-201ENST00000621699 66 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGA9Q9Y5G4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
PCDHGA9Q9Y5G4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORA63.7-201ENST00000365579 123 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.557-201ENST00000384680 107 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 RN7SKP220-201ENST00000410611 288 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 COTL1P1-201ENST00000422309 375 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 AC104332.2-201ENST00000429959 156 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 CBX3P6-201ENST00000430257 527 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL23AP22-201ENST00000437556 453 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 AC132942.1-201ENST00000486753 483 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-586P-201ENST00000517265 104 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 CYCSP23-201ENST00000519781 313 ntBASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA9Q9Y5G4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR422A-201ENST00000362286 90 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-874P-201ENST00000362390 105 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-378P-201ENST00000384324 107 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-738P-201ENST00000384531 106 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR627-201ENST00000384979 97 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU2-63P-201ENST00000410792 194 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AL356968.1-201ENST00000416622 474 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 HMGN1P18-201ENST00000457642 277 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AP000870.1-201ENST00000472927 406 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-327P-201ENST00000516270 127 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC068657.1-201ENST00000520807 306 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC104027.1-201ENST00000521887 300 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AL442163.3-201ENST00000554110 156 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 MIR5188-201ENST00000583467 113 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 SNORD58B-201ENST00000607313 66 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC093732.2-201ENST00000607950 274 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC005296.1-201ENST00000616145 209 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 AC090517.3-201ENST00000625170 141 ntBASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA9Q9Y5G4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.27-201ENST00000362540 103 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.152-201ENST00000363578 100 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU4-50P-201ENST00000364361 141 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 Y_RNA.389-201ENST00000383924 113 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL21P75-201ENST00000396599 483 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL21P28-201ENST00000401418 483 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 RNU6-985P-201ENST00000410182 104 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 MTCO3P8-201ENST00000453691 755 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 RPL21P39-201ENST00000463605 483 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 UBE2DNL-203ENST00000474922 222 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
PCDHGA9Q9Y5G4 AC107032.1-201ENST00000485945 480 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms