Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.26-201ENST00000362539 101 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-212P-201ENST00000362642 104 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-529P-201ENST00000363383 104 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.210-201ENST00000364161 110 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 SNORD14.1-201ENST00000365609 90 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-17P-201ENST00000384245 107 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-18P-201ENST00000384527 107 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AL512633.1-201ENST00000399931 655 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-101P-201ENST00000410323 104 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AC012306.1-201ENST00000423267 114 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 MTCO3P29-201ENST00000432119 779 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 Z82188.1-201ENST00000436709 154 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AF186996.7-201ENST00000492781 209 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 RAC1P5-201ENST00000512182 576 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AC131281.1-201ENST00000522984 164 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AC073410.2-201ENST00000603240 332 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AC006023.1-201ENST00000603944 259 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AC124312.5-201ENST00000604451 268 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AL138963.2-201ENST00000605137 226 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 U2.1-201ENST00000618978 145 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 AL450472.1-202ENST00000637286 180 ntBASIC3.14□□□□□ -1.91
PCDHB1Q9Y5F3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 OR56A5-201ENST00000340110 738 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-137P-201ENST00000363680 108 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 U3.13-201ENST00000364804 214 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.396-201ENST00000383949 103 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 RNU1-57P-201ENST00000384491 166 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MIR32-201ENST00000384965 70 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MIR628-201ENST00000385229 95 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-1109P-201ENST00000391187 107 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MIR1302-3-201ENST00000408128 138 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC097463.2-201ENST00000421074 142 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC107083.1-201ENST00000439643 279 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 PCNPP5-201ENST00000452246 481 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC112771.1-201ENST00000463581 102 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 RPL31P41-201ENST00000477967 372 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 RN7SKP272-201ENST00000516988 232 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC022616.4-201ENST00000522985 181 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC006600.1-201ENST00000572529 153 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MIR3668-201ENST00000582138 75 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MIR4672-201ENST00000583126 81 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MIR4765-201ENST00000585007 77 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 PRR13P7-201ENST00000605538 430 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC093732.2-201ENST00000607950 274 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 SNORD98-201ENST00000636377 67 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AL079305.1-201ENST00000623159 3008 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
PCDHB1Q9Y5F3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RNU7-87P-201ENST00000459343 62 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RN7SL429P-201ENST00000479090 223 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 AC090525.1-201ENST00000479116 478 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RN7SL489P-201ENST00000486185 223 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RN7SL327P-201ENST00000488659 223 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 HMGB1P35-201ENST00000503360 598 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 ANXA2P1-201ENST00000505539 926 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RNA5SP112-201ENST00000515937 99 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RNU5F-2P-201ENST00000516066 82 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-1271P-201ENST00000517049 105 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 MYL12BP1-201ENST00000569826 507 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 AC107871.2-201ENST00000612894 502 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 RN7SL853P-201ENST00000617250 223 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHB1Q9Y5F3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-655P-201ENST00000362858 107 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.188-201ENST00000363952 111 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.222-201ENST00000364264 102 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 RNU6-806P-201ENST00000365147 105 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 Y_RNA.380-201ENST00000365663 111 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 SNORA7.4-201ENST00000384249 137 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 MIR186-201ENST00000384988 86 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 RPS26P42-201ENST00000413485 326 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 Z98742.2-201ENST00000431564 187 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 RPS12P18-201ENST00000442381 270 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 DYNLT3P2-201ENST00000442517 295 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 RPS27P29-201ENST00000463110 252 ntBASIC3.11□□□□□ -1.91
PCDHB1Q9Y5F3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms