Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORA11.2-201ENST00000408318 127 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 RN7SKP123-201ENST00000410732 291 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 RPL26P27-201ENST00000414397 437 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AL365496.1-201ENST00000426885 215 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 ARL5AP4-201ENST00000430731 512 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AL591043.1-201ENST00000432461 424 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AC107083.1-201ENST00000439643 279 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AL513124.1-201ENST00000450410 614 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 LINC01399-202ENST00000458450 244 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 RNU7-23P-201ENST00000459465 62 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AC083906.5-201ENST00000503722 328 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 RNA5SP385-201ENST00000515947 110 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.680-201ENST00000516441 93 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-570P-201ENST00000517051 105 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AC107016.2-201ENST00000547968 190 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AC060766.3-201ENST00000591442 263 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 AC024153.1-201ENST00000603103 365 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 U2.21-201ENST00000637295 81 ntBASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTDP1Q9Y5B0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AC233981.2-201ENST00000611524 1614 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 RNU1-75P-201ENST00000347264 129 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.14-201ENST00000362415 103 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-778P-201ENST00000363269 103 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AC010401.1-201ENST00000463867 348 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 RN7SL442P-201ENST00000473804 320 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 TRBVB-201ENST00000477100 408 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AL442163.3-201ENST00000554110 156 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 MIR3128-201ENST00000581957 66 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AL355877.2-201ENST00000603670 358 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AC096772.1-201ENST00000609146 564 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AC073476.4-201ENST00000628409 72 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 AC241585.2-209ENST00000638217 143 ntBASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CTDP1Q9Y5B0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-884P-201ENST00000363889 107 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RNU4-9P-201ENST00000364951 139 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RNU1-73P-201ENST00000383971 164 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 MIR518D-201ENST00000385014 87 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RPL21P75-201ENST00000396599 483 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RPL21P28-201ENST00000401418 483 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-130P-201ENST00000411112 103 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-1245P-201ENST00000411130 106 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AL590556.1-201ENST00000423231 483 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 BX679664.1-201ENST00000434429 253 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC098831.1-201ENST00000440661 216 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RPL21P39-201ENST00000463605 483 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RPL39P38-201ENST00000467018 153 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC087190.1-201ENST00000484462 480 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC107032.1-201ENST00000485945 480 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC132942.1-201ENST00000486753 483 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC093591.1-201ENST00000491435 481 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 RPL21P16-201ENST00000495531 483 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC007536.1-201ENST00000533382 349 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 MTND5P6-201ENST00000422338 1798 ntBASIC3.48□□□□□ -1.85
CTDP1Q9Y5B0 AC026241.1-201ENST00000517873 2142 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.60-201ENST00000362831 98 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.105-201ENST00000363182 111 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 SNORA20.1-201ENST00000364790 130 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 SNORD21-201ENST00000383953 95 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 RNU6-968P-201ENST00000384076 107 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.458-201ENST00000384240 102 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 Y_RNA.477-201ENST00000384352 108 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 RNA5SP354-201ENST00000391247 136 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 TOMM22P6-201ENST00000465035 409 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 ANXA2P1-201ENST00000505539 926 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 MIR2355-201ENST00000517199 87 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 MRPS36P4-201ENST00000534436 298 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 AC008739.2-201ENST00000597006 317 ntBASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.47□□□□□ -1.85
CTDP1Q9Y5B0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 RNU6-212P-201ENST00000362642 104 ntBASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 RNU6-942P-201ENST00000363002 107 ntBASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 RNU6-1026P-201ENST00000384465 108 ntBASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 Y_RNA.510-201ENST00000384511 114 ntBASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 MIR888-201ENST00000401186 77 ntBASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 RNA5SP274-201ENST00000410484 108 ntBASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 RPL21P38-201ENST00000418090 167 ntBASIC3.46□□□□□ -1.86
CTDP1Q9Y5B0 AL358453.1-201ENST00000422522 250 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms