Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 RPL39P39-201ENST00000455840 151 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 MTND2P33-201ENST00000506452 1031 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 HMGB1P28-201ENST00000507778 552 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 AC104136.1-201ENST00000512969 394 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 AC116347.2-201ENST00000514912 523 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 SNORA25.12-201ENST00000516202 82 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 MIR4666A-201ENST00000580160 79 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 MIR4305-201ENST00000583252 102 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 AL390123.1-201ENST00000603216 237 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 RMST_10.1-201ENST00000616309 154 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 AL603839.4-201ENST00000624658 1005 ntBASIC-0.43□□□□□ -2.48
AP4S1Q9Y587 SNORA33-201ENST00000363664 130 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 RNA5SP517-201ENST00000364724 117 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 SNORD116-20-201ENST00000384529 92 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 AC010154.1-201ENST00000425857 269 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 RPS25P9-201ENST00000435591 252 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 ELOCP30-201ENST00000447108 299 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 AC079776.3-201ENST00000450665 370 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 RPL39P36-201ENST00000490784 156 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 MTND2P7-201ENST00000521337 640 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 AC016256.1-201ENST00000547971 354 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 MIR1273G-201ENST00000577677 100 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 AC091135.1-201ENST00000585943 307 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 BNIP3P9-201ENST00000603714 553 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 AC064807.4-201ENST00000607201 407 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 MIR8087-201ENST00000612745 78 ntBASIC-0.44□□□□□ -2.48
AP4S1Q9Y587 MIR18A-201ENST00000362310 71 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 RNU4-15P-201ENST00000362613 141 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 SNORD56.4-201ENST00000363883 71 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 MRPS36P1-201ENST00000421291 307 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AL358176.2-201ENST00000425769 204 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 ART2BP-201ENST00000453501 499 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AL122001.1-201ENST00000457027 370 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AC114981.1-201ENST00000503897 678 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AC112693.2-201ENST00000556538 232 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AC018889.1-201ENST00000605372 397 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 RNU6-94P-201ENST00000607728 107 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AL391903.3-201ENST00000612158 163 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 AL136317.1-201ENST00000612653 226 ntBASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
AP4S1Q9Y587 SNORD114-26-201ENST00000363543 72 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 U8.7-201ENST00000364940 136 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 SNORA72.2-201ENST00000365028 127 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 RNU6-932P-201ENST00000391108 106 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 SNORA40.8-201ENST00000411034 126 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 MTCO3P43-201ENST00000440974 771 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 MTCO1P19-201ENST00000443487 500 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AC016925.1-201ENST00000458303 298 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 RNU7-140P-201ENST00000459546 60 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 OR9P1P-201ENST00000496431 281 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 SNORA31.10-201ENST00000516482 106 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 RNU6-856P-201ENST00000516959 98 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AP002001.1-203ENST00000534002 267 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AC090049.2-201ENST00000550377 109 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AC011712.1-201ENST00000588959 234 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AC004223.2-201ENST00000590309 544 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 AL136363.2-201ENST00000604173 851 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 MIR338-201ENST00000636369 67 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.46□□□□□ -2.48
AP4S1Q9Y587 RNU4-76P-201ENST00000364509 141 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 MIR145-201ENST00000384967 88 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 MIR644A-201ENST00000385262 94 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 RNA5SP109-201ENST00000391010 116 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 AC243964.1-201ENST00000441814 261 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 AC016717.1-201ENST00000448918 286 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 RPL7P55-201ENST00000450522 746 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 MTND1P15-201ENST00000579262 949 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 uc_338.34-201ENST00000617467 174 ntBASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.47□□□□□ -2.48
AP4S1Q9Y587 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 MIR103A2-201ENST00000362154 78 ntBASIC-0.48□□□□□ -2.49
AP4S1Q9Y587 RNU6-216P-201ENST00000363282 104 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms