Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 RNA5SP50-201ENST00000363731 107 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 RNU6-270P-201ENST00000364131 105 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 Y_RNA.272-201ENST00000364696 102 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 SNORA26.3-201ENST00000391119 136 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 ELOCP21-201ENST00000412558 336 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 NDUFS5P4-201ENST00000412983 318 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 BTF3P11-201ENST00000426582 477 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 HMGN2P10-201ENST00000448085 265 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 AC091179.3-201ENST00000474761 144 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 AL121594.1-201ENST00000475906 575 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 RNU6-155P-201ENST00000516347 100 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 RNA5SP54-201ENST00000516951 92 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 CKS1BP7-201ENST00000522230 235 ntBASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHMP3Q9Y3E7 AC092593.1-201ENST00000515413 1815 ntBASIC4.46□□□□□ -1.69
CHMP3Q9Y3E7 MAPK10-373ENST00000641983 6772 ntBASIC4.46□□□□□ -1.69
CHMP3Q9Y3E7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 RNU6-727P-201ENST00000363592 107 ntBASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 Y_RNA.179-201ENST00000363844 90 ntBASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 BMS1P22-201ENST00000414726 313 ntBASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 AC019205.3-201ENST00000424573 156 ntBASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 RPL26P9-201ENST00000457466 433 ntBASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 AC090897.2-201ENST00000581715 130 ntBASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHMP3Q9Y3E7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 RNU6-622P-201ENST00000384272 103 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 Y_RNA.498-201ENST00000384460 102 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 Y_RNA.571-201ENST00000384753 98 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 HMGN2P8-201ENST00000391458 268 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 RNA5SP129-201ENST00000410276 118 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 RPS26P42-201ENST00000413485 326 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 AC005300.1-201ENST00000428401 373 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 CYCSP4-201ENST00000429682 331 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 AC090525.1-201ENST00000479116 478 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 AC021739.1-201ENST00000559631 174 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 MIR5692C2-201ENST00000577959 77 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 MAPK10-372ENST00000641954 3413 ntBASIC4.45□□□□□ -1.7
CHMP3Q9Y3E7 ADAM3A-203ENST00000461344 2157 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 RNU1-18P-201ENST00000363062 164 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 RNU6-131P-201ENST00000391144 107 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 AL512633.1-201ENST00000399931 655 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 RNU2-2P-201ENST00000410396 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 RN7SL93P-201ENST00000463035 293 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 RPL21P10-201ENST00000463521 490 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 AC140059.1-201ENST00000489238 361 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 ACA59.2-201ENST00000517061 156 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 SUMO2P18-201ENST00000518873 252 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 MIR4644-201ENST00000579929 84 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 RNU2-4P-201ENST00000606190 192 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.15-201ENST00000611544 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.16-201ENST00000613119 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.12-201ENST00000613778 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.9-201ENST00000615427 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.11-201ENST00000616345 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.2-201ENST00000616535 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.3-201ENST00000617785 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.19-201ENST00000618602 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 RNU2-1-201ENST00000618664 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.6-201ENST00000619225 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.5-201ENST00000619465 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 U2.10-201ENST00000620268 191 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 AC022336.2-201ENST00000568966 2538 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 AL021368.2-201ENST00000606125 5352 ntBASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.44□□□□□ -1.7
CHMP3Q9Y3E7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 RNU6-50P-201ENST00000362356 103 ntBASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 RNU4-35P-201ENST00000362588 141 ntBASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 RNU6-1272P-201ENST00000362776 107 ntBASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 RNA5SP72-201ENST00000364442 117 ntBASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 RNU6-818P-201ENST00000364837 108 ntBASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 RNU6-1117P-201ENST00000384525 104 ntBASIC4.43□□□□□ -1.7
CHMP3Q9Y3E7 MIR34B-201ENST00000385076 84 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms