Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RNU6-48P-201ENST00000384161 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-1200P-201ENST00000384162 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-36P-201ENST00000384172 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-4P-201ENST00000384205 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-5P-201ENST00000384238 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-3P-201ENST00000384314 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-16P-201ENST00000384385 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-15P-201ENST00000384534 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-2-201ENST00000384627 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-29P-201ENST00000384637 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-9-201ENST00000384776 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-33P-201ENST00000384793 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 MIR122-201ENST00000385044 85 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 MRPL42P2-201ENST00000403169 426 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AL133396.1-201ENST00000432048 687 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC073910.1-201ENST00000445047 438 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 PRPS1P1-201ENST00000445305 876 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC034244.1-201ENST00000507687 207 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-1041P-201ENST00000516254 102 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNA5SP503-201ENST00000517047 117 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC109479.2-201ENST00000517842 174 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC023050.3-201ENST00000541142 333 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AL442163.3-201ENST00000554110 156 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC021231.3-201ENST00000558497 370 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 SNORA59B-202ENST00000578183 701 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AP005136.1-201ENST00000579765 429 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4999-201ENST00000585029 91 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC078795.3-201ENST00000602913 472 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC018714.1-201ENST00000605028 208 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC105129.3-201ENST00000605455 485 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC008945.2-201ENST00000606056 604 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-6P-201ENST00000606623 107 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC138749.5-201ENST00000611461 208 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC116165.2-201ENST00000616705 206 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC008147.4-201ENST00000617570 1204 ntBASIC0.76□□□□□ -2.29
HDGFL3Q9Y3E1 AC092268.1-201ENST00000342691 405 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 Y_RNA.4-201ENST00000362333 112 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-906P-201ENST00000384700 70 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 Y_RNA.576-201ENST00000384781 102 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 RPS29P13-201ENST00000402041 169 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AL356776.1-201ENST00000406574 447 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 MIR1276-201ENST00000408707 83 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AC013410.2-201ENST00000422627 201 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 RPL23AP95-201ENST00000426806 265 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 USP9YP14-201ENST00000430663 563 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 MTATP6P16-201ENST00000434543 526 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 RN7SKP265-201ENST00000516448 223 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 CBX3P8-201ENST00000532412 525 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 HSPE1P4-201ENST00000550617 308 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AC107304.1-201ENST00000604229 296 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AL158050.2-201ENST00000605336 568 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 AC040896.1-201ENST00000613819 479 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 MIR6767-201ENST00000637302 66 ntBASIC0.75□□□□□ -2.29
HDGFL3Q9Y3E1 MIR96-201ENST00000362288 78 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-428P-201ENST00000362942 107 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 RNU1-93P-201ENST00000364704 169 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 SNORD115-7-201ENST00000365306 82 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 SNORA4.2-201ENST00000365313 147 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-378P-201ENST00000384324 107 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 HMGN1P14-201ENST00000412459 517 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 COX6CP10-201ENST00000416832 224 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC060773.1-201ENST00000421698 310 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 SNAP23P1-201ENST00000433229 246 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC067942.3-201ENST00000512025 362 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC112206.4-201ENST00000515142 405 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC022616.3-201ENST00000523940 148 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC136932.1-201ENST00000574771 208 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 MIR4709-201ENST00000577272 72 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 MIR3973-201ENST00000579824 107 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AP000811.1-201ENST00000603803 651 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AL391646.1-201ENST00000603860 190 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC211469.2-201ENST00000605461 205 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AL121992.2-201ENST00000606262 256 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AC126177.8-201ENST00000618339 1015 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AL450472.1-202ENST00000637286 180 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 AL445984.1-201ENST00000637834 659 ntBASIC0.74□□□□□ -2.29
HDGFL3Q9Y3E1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 RNU5F-6P-201ENST00000362979 116 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-534P-201ENST00000364877 106 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 RNU6-1026P-201ENST00000384465 108 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 POLR2J4-204ENST00000418424 324 ntBASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.73□□□□□ -2.29
HDGFL3Q9Y3E1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms