Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL645568.3-201ENST00000433683 316 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 SEPT14P3-201ENST00000439401 183 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL732372.2-207ENST00000445840 183 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 SEPT14P2-201ENST00000453405 183 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 SEPT14P4-201ENST00000513445 186 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 SNORD60.2-201ENST00000516883 86 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AC087854.1-201ENST00000519706 414 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 FO082796.1-201ENST00000523795 183 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AC026271.5-201ENST00000577873 130 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 MIR5692C1-201ENST00000585309 91 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL162413.1-201ENST00000603198 110 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL450472.1-202ENST00000637286 180 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AC092268.1-201ENST00000342691 405 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 SNORD32B-201ENST00000364460 84 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 Y_RNA.318-201ENST00000365131 97 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-483P-201ENST00000384088 108 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AC244670.1-201ENST00000436879 112 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AL137159.1-201ENST00000452808 512 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AC116337.1-201ENST00000509680 687 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-1281P-201ENST00000516223 105 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-506P-201ENST00000516553 94 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AP005639.2-201ENST00000527592 928 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 HSPE1P4-201ENST00000550617 308 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AC245505.1-201ENST00000556398 224 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AC104581.2-201ENST00000572227 430 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 EIF1P4-201ENST00000572664 335 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AC011494.1-201ENST00000596454 237 ntBASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAPPC4Q9Y296 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 Y_RNA.372-201ENST00000365599 102 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 SNORD116-4-201ENST00000384733 96 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 SNORA40.19-201ENST00000390846 128 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 EIF4E2P1-201ENST00000393781 255 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 MTCYBP2-201ENST00000407745 171 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AL158823.1-201ENST00000418441 478 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AL590135.1-201ENST00000422215 156 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AL590556.1-201ENST00000423231 483 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC019205.3-201ENST00000424573 156 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC016700.2-201ENST00000446011 156 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 PRELID3BP1-201ENST00000457142 540 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC015911.1-201ENST00000495111 156 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC145146.1-201ENST00000496370 254 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 RPL23AP63-201ENST00000498752 471 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 SNORA19.2-201ENST00000516013 114 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 SNORA31.16-201ENST00000516773 139 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 Y_RNA.704-201ENST00000516851 102 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AL157687.1-201ENST00000554853 619 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 BNIP3P25-201ENST00000596023 559 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-89P-201ENST00000606519 100 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AC063943.3-201ENST00000615562 356 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 AL359314.1-201ENST00000616913 261 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 SNORA43.4-201ENST00000629559 138 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 MIR1321-201ENST00000637766 79 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 OR4G1P-203ENST00000641984 1631 ntBASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
TRAPPC4Q9Y296 RNY3P3-201ENST00000363816 102 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-1329P-201ENST00000365664 107 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MIR518A2-201ENST00000384966 87 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MIR181A1-201ENST00000385026 110 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MIR1262-201ENST00000408276 93 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MIR1289-2-201ENST00000408360 111 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RNA5SP201-201ENST00000410316 124 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 RN7SKP284-201ENST00000411002 343 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 MTCO1P20-201ENST00000425366 358 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 ERLEC1P1-201ENST00000433806 578 ntBASIC1.53□□□□□ -2.16
TRAPPC4Q9Y296 AL359672.1-201ENST00000442302 409 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms