Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL590004.2-201ENST00000404787 371 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 U6atac.2-201ENST00000408644 118 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 RPL30P4-201ENST00000429309 333 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 MTND3P9-201ENST00000429526 346 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 AL356320.1-201ENST00000429616 163 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 RN7SL636P-201ENST00000497504 294 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 CKS1BP7-201ENST00000522230 235 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 MTCO3P13-201ENST00000577757 781 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 AC096772.1-201ENST00000609146 564 ntBASIC3.92□□□□□ -1.78
CDK11AQ9UQ88 OR56A5-201ENST00000340110 738 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 RNU6-174P-201ENST00000410406 106 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 Y_RNA.646-201ENST00000410980 101 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 HMGN2P35-201ENST00000412164 270 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 AC004383.1-201ENST00000438135 289 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 AC243964.1-201ENST00000441814 261 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 AC007969.2-201ENST00000441891 191 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 HMGB1P24-202ENST00000615653 685 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 RBBP8P1-201ENST00000449447 1844 ntBASIC3.91□□□□□ -1.78
CDK11AQ9UQ88 RNU6-1059P-201ENST00000363752 98 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 Y_RNA.404-201ENST00000383978 102 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 RNU6-842P-201ENST00000384269 107 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 Y_RNA.473-201ENST00000384333 102 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 MIR1302-11-201ENST00000408051 138 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 MIR1302-9-201ENST00000408365 138 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 MIR1302-10-201ENST00000408734 138 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 EIF4EP2-201ENST00000422816 654 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 RPL23AP50-201ENST00000434149 455 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 MTCO3P10-201ENST00000455912 772 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 RPS27AP9-201ENST00000477681 438 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 AC027575.1-201ENST00000481064 460 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 AC093303.1-201ENST00000514549 295 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 RNU6-1213P-201ENST00000517075 94 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 IGKV3-31-201ENST00000523109 329 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 MIR5571-201ENST00000577998 113 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 MIR1302-2-201ENST00000607096 138 ntBASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CDK11AQ9UQ88 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 SNORA75.6-201ENST00000391318 127 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 RN7SKP223-201ENST00000410582 62 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 MTCO2P12-201ENST00000427426 682 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 SUMO1P4-201ENST00000429430 302 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 RPS29P27-201ENST00000463711 170 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AC005741.1-201ENST00000511094 432 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AC093249.1-201ENST00000567049 203 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 AC105137.2-201ENST00000569073 466 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 MIR4648-201ENST00000580107 72 ntBASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.89□□□□□ -1.79
CDK11AQ9UQ88 RNU6-622P-201ENST00000384272 103 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 MIR544A-201ENST00000384855 91 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 AP001025.1-201ENST00000486139 332 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 AC234781.5-201ENST00000508429 271 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 RNU6-264P-201ENST00000517134 104 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 AC090897.2-201ENST00000581715 130 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 AL356055.1-201ENST00000602528 446 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 AC007792.1-201ENST00000623023 402 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 AC009541.1-201ENST00000438279 2662 ntBASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK11AQ9UQ88 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 RNU6-692P-201ENST00000384496 107 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 RNU6-1222P-201ENST00000384615 107 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 SNORA41-201ENST00000384675 132 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 EIF1AXP1-201ENST00000419267 435 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 AC007677.1-201ENST00000445757 515 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 RPL36AP48-201ENST00000485521 314 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 AL442663.2-201ENST00000554385 511 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 AL359198.2-201ENST00000611836 194 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 AC002543.1-201ENST00000299783 1954 ntBASIC3.87□□□□□ -1.79
CDK11AQ9UQ88 MTND5P9-201ENST00000503854 1755 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 RNA5SP456-201ENST00000364002 114 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 RNU6-1040P-201ENST00000383974 107 ntBASIC3.86□□□□□ -1.79
CDK11AQ9UQ88 RNU6-890P-201ENST00000384121 107 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms