Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 RN7SL542P-201ENST00000467147 294 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 AC108043.1-201ENST00000512696 574 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 SNORA25.14-201ENST00000516481 132 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 RNA5SP380-201ENST00000517190 98 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 AC104027.1-201ENST00000521887 300 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 CYP4A27P-201ENST00000567218 190 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 MIR3136-201ENST00000583498 78 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 AC037487.3-201ENST00000606668 112 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 AL357075.2-201ENST00000614906 189 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 ZNF204P-201ENST00000416749 2397 ntBASIC4.24□□□□□ -1.73
BRPF3Q9ULD4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 SNORD9-201ENST00000362566 104 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 Y_RNA.44-201ENST00000362676 108 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 RNU1-105P-201ENST00000363470 161 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 SNORD56.3-201ENST00000363507 71 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 Y_RNA.230-201ENST00000364348 109 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 RNU6-1062P-201ENST00000383908 107 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 Y_RNA.569-201ENST00000384749 103 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 MIR134-201ENST00000385258 73 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 MIR1298-201ENST00000408783 112 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 AL390729.2-201ENST00000416137 156 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 AL441985.1-201ENST00000457727 251 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 RPS29P12-201ENST00000460178 152 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 AC007215.1-201ENST00000464893 276 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 RNU5F-2P-201ENST00000516066 82 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 RPS15AP11-201ENST00000594193 385 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 RNU6-91P-201ENST00000607774 107 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 MIR6798-201ENST00000612887 67 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 AC010889.1-201ENST00000566193 2666 ntBASIC4.23□□□□□ -1.73
BRPF3Q9ULD4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 RNU4-56P-201ENST00000364700 142 ntBASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 RNU6-1175P-201ENST00000365200 107 ntBASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 RNU1-95P-201ENST00000516357 160 ntBASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 Y_RNA.683-201ENST00000516508 93 ntBASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 SNORA64.4-201ENST00000516632 81 ntBASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 RNU1-128P-201ENST00000516704 160 ntBASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 AC004792.1-201ENST00000614523 137 ntBASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BRPF3Q9ULD4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
BRPF3Q9ULD4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 RNU6-529P-201ENST00000363383 104 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.555-201ENST00000384673 110 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 MIR549A-201ENST00000385268 96 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 U3.26-201ENST00000391236 204 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 MIR208B-201ENST00000401172 77 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 MIR1289-1-201ENST00000408836 144 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 RN7SKP202-201ENST00000410439 330 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 AC096649.2-201ENST00000416186 393 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 AL138752.1-201ENST00000452964 351 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 RNU1-45P-201ENST00000517191 141 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 AC005176.2-201ENST00000596933 147 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 AC019176.2-201ENST00000611579 315 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 AC012442.3-202ENST00000636742 206 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 PWAR6-201ENST00000552334 4618 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 AC138915.1-201ENST00000565427 1685 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 BX322639.1-202ENST00000423987 2213 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 MTND5P35-201ENST00000557537 1720 ntBASIC4.21□□□□□ -1.74
BRPF3Q9ULD4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.83-201ENST00000363005 113 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.179-201ENST00000363844 90 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 MIR147B-201ENST00000390185 80 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 MTND2P29-201ENST00000438595 412 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 AC007395.1-201ENST00000451333 677 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 CYCSP23-201ENST00000519781 313 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 AC025281.1-201ENST00000567026 265 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 AC034105.4-201ENST00000568304 277 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 AC008749.1-201ENST00000597650 306 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 AC004832.5-201ENST00000608677 401 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 FTX_2.1-201ENST00000618816 94 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 IGHVIII-44-202ENST00000636235 289 ntBASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.2□□□□□ -1.74
BRPF3Q9ULD4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 AC135776.4-201ENST00000624300 1904 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 RNU6-1010P-201ENST00000362757 107 ntBASIC4.19□□□□□ -1.74
BRPF3Q9ULD4 Y_RNA.76-201ENST00000362931 109 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms