Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AC090897.2-201ENST00000581715 130 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 AC005899.2-201ENST00000584353 90 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.53□□□□□ -2
SIX4Q9UIU6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 AL355877.2-201ENST00000603670 358 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 AC009318.2-201ENST00000610917 651 ntBASIC2.53□□□□□ -2
SIX4Q9UIU6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SIX4Q9UIU6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.53□□□□□ -2
SIX4Q9UIU6 AC009541.1-201ENST00000438279 2662 ntBASIC2.53□□□□□ -2.01
SIX4Q9UIU6 AC135776.4-201ENST00000624300 1904 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.112-201ENST00000363250 102 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 RNA5SP126-201ENST00000365092 109 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 RNU6-487P-201ENST00000365430 104 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 RNU6-784P-201ENST00000384330 106 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 RNU6-748P-201ENST00000384648 107 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 MIR147B-201ENST00000390185 80 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 EIF4EP2-201ENST00000422816 654 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 AL118496.2-201ENST00000448300 230 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 AC012308.1-201ENST00000451232 178 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 SNRPGP7-201ENST00000469016 106 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 GZMAP1-201ENST00000503054 631 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 RNU6-976P-201ENST00000516086 111 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 RNU6-307P-201ENST00000516743 106 ntBASIC2.52□□□□□ -2.01
SIX4Q9UIU6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.52□□□□□ -2.01
SIX4Q9UIU6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SIX4Q9UIU6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.51□□□□□ -2.01
SIX4Q9UIU6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.496-201ENST00000384444 101 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX4Q9UIU6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX4Q9UIU6 MRPS18CP6-201ENST00000423587 223 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AC092427.1-202ENST00000430569 476 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AP001324.2-201ENST00000461163 319 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 RPL30P12-201ENST00000474666 353 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AC068781.1-201ENST00000488231 618 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AC090096.1-201ENST00000489168 390 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.661-201ENST00000516003 99 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 RNA5SP281-201ENST00000516504 135 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 MIR5696-201ENST00000578474 85 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 MIR5007-201ENST00000583098 95 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AC060766.3-201ENST00000591442 263 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.51□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.812-201ENST00000610788 101 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.784-201ENST00000613803 101 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.787-201ENST00000616522 101 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.780-201ENST00000617336 101 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.801-201ENST00000619005 101 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 SNORA43.4-201ENST00000629559 138 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SIX4Q9UIU6 ZNF299P-201ENST00000406845 1804 ntBASIC2.51□□□□□ -2.01
SIX4Q9UIU6 MTND4P27-201ENST00000450813 1354 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SIX4Q9UIU6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SIX4Q9UIU6 RNU6-490P-201ENST00000362985 107 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 RNY1P16-201ENST00000363063 111 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 SNORA22B-201ENST00000383876 138 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SIX4Q9UIU6 RNU4-53P-201ENST00000410828 140 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 AC018865.2-201ENST00000423631 129 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 RPL23AP95-201ENST00000426806 265 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 RPS15AP28-201ENST00000435088 386 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 AP000705.1-201ENST00000454567 350 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 AL163540.1-201ENST00000485382 386 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 AC105758.1-201ENST00000506038 399 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 MRPS36P2-201ENST00000512569 299 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 MRPS36P4-201ENST00000534436 298 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 AL442663.2-201ENST00000554385 511 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 AC040896.1-201ENST00000613819 479 ntBASIC2.5□□□□□ -2.01
SIX4Q9UIU6 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.5□□□□□ -2.01
SIX4Q9UIU6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
SIX4Q9UIU6 MTND5P6-201ENST00000422338 1798 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 Y_RNA.148-201ENST00000363557 117 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RNU6-595P-201ENST00000363944 107 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RNU6-99P-201ENST00000364721 107 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RNU1-51P-201ENST00000365345 176 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AL590004.1-201ENST00000405321 300 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AL358075.3-201ENST00000426289 226 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 AL035666.1-201ENST00000446195 348 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 RPL39P29-201ENST00000447779 157 ntBASIC2.49□□□□□ -2.01
SIX4Q9UIU6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms