Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RN7SKP158-201ENST00000410453 326 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AL139396.1-201ENST00000421137 167 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC018868.1-201ENST00000491307 315 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC145146.1-201ENST00000496370 254 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC103851.1-201ENST00000506833 274 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 RNU6-567P-201ENST00000516746 107 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 RNU1-104P-201ENST00000517280 175 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC018630.3-201ENST00000542637 96 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC016256.1-201ENST00000547971 354 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 FGF7P1-201ENST00000582820 288 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 C8orf59P2-201ENST00000603441 271 ntBASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
LIMA1Q9UHB6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 Z82209.1-201ENST00000422141 2135 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 Y_RNA.142-201ENST00000363491 102 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 Y_RNA.263-201ENST00000364659 114 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 SNORA25B-201ENST00000365507 128 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 RNU1-52P-201ENST00000384190 164 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 RNU1-148P-201ENST00000384472 162 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 RNU6-1009P-201ENST00000390996 107 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 SNORA46.1-201ENST00000391069 153 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 RNU2-32P-201ENST00000411193 191 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 RN7SL636P-201ENST00000497504 294 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 Y_RNA.682-201ENST00000516457 100 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 RNA5SP24-201ENST00000516478 95 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 MIR4790-201ENST00000577799 79 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 MIR3923-201ENST00000579521 83 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 MIR5002-201ENST00000584713 97 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AC124303.1-201ENST00000605703 360 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AL132765.2-201ENST00000610812 351 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AL161423.1-201ENST00000613700 262 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AC009831.4-201ENST00000620744 325 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AC112487.2-201ENST00000637950 304 ntBASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
LIMA1Q9UHB6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 RNU6-546P-201ENST00000383991 107 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 Y_RNA.529-201ENST00000384586 119 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 RNU6-306P-201ENST00000384617 107 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 MTCYBP2-201ENST00000407745 171 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AC007064.1-201ENST00000412238 351 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 Z82205.1-201ENST00000428456 297 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 WARS2P1-201ENST00000429678 537 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AC021146.2-201ENST00000504736 556 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AC105029.1-201ENST00000520250 669 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 POLR3GP2-201ENST00000588366 668 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 SNORD14A-201ENST00000606526 91 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 AC019193.3-201ENST00000609144 554 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 CTSLP2-204ENST00000629029 392 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 TPTEP1-208ENST00000636884 213 ntBASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIMA1Q9UHB6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 RNU6-968P-201ENST00000384076 107 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 RNU6-784P-201ENST00000384330 106 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 Y_RNA.474-201ENST00000384341 102 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 RNA5SP201-201ENST00000410316 124 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 CBX3P6-201ENST00000430257 527 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 HMGB1P18-201ENST00000438801 619 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 AP001486.1-201ENST00000463339 476 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 AC008549.1-201ENST00000512900 643 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 RNU6-277P-201ENST00000516272 106 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 Y_RNA.691-201ENST00000516611 103 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 AC022616.8-201ENST00000533569 253 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 CYCSP26-201ENST00000534107 320 ntBASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
LIMA1Q9UHB6 CYP4A27P-201ENST00000567218 190 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms