Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 SNORD115-3-201ENST00000363100 82 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 Y_RNA.123-201ENST00000363338 102 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 Y_RNA.157-201ENST00000363638 102 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 RNU6-378P-201ENST00000384324 107 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 RNU6-933P-201ENST00000384424 107 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 RNU6-95P-201ENST00000384697 107 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AL512604.1-201ENST00000404812 257 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 MIR1277-201ENST00000408536 78 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 RNU6-1148P-201ENST00000410992 104 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AC009963.1-201ENST00000417265 157 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AL590632.1-201ENST00000424289 371 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 RPL23AP42-201ENST00000471152 471 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 RNU6-1314P-201ENST00000517139 104 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 HSPE1P18-201ENST00000517602 280 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AC109446.1-201ENST00000566172 220 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 MIR3672-201ENST00000584290 82 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 MIR8076-201ENST00000611401 83 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AC005520.5-201ENST00000613926 164 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AC100810.6-201ENST00000638068 285 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 AC027514.1-201ENST00000588561 1603 ntBASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
CPSF2Q9P2I0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 U3.9-201ENST00000363823 204 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 RNU6-234P-201ENST00000365229 104 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 MIR521-1-201ENST00000384902 87 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 MIR208B-201ENST00000401172 77 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AC012306.1-201ENST00000423267 114 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AL645568.3-201ENST00000433683 316 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AC132942.1-201ENST00000486753 483 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AC093259.1-201ENST00000509755 300 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 RNU2-44P-201ENST00000516795 194 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 MIR3942-201ENST00000585264 109 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AC023043.2-201ENST00000589678 1026 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AC009994.1-201ENST00000606889 253 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AL359314.1-201ENST00000616913 261 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AL136221.1-201ENST00000621449 509 ntBASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CPSF2Q9P2I0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.05
CPSF2Q9P2I0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 Y_RNA.212-201ENST00000364177 102 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 RNU6-1286P-201ENST00000383871 107 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 RNU6-26P-201ENST00000383985 107 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 MIR29C-201ENST00000385231 88 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 SNORA40.19-201ENST00000390846 128 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 RNA5SP450-201ENST00000411206 102 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 FCF1P9-201ENST00000412546 282 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 MTND1P11-201ENST00000456661 876 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 snoU13.6-201ENST00000458785 104 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 MRPS17P9-201ENST00000511924 393 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 AL096840.1-201ENST00000603287 93 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 MIR3976-201ENST00000606807 139 ntBASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.21□□□□□ -2.06
CPSF2Q9P2I0 RNU6-562P-201ENST00000362731 107 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 Y_RNA.151-201ENST00000363566 112 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 SNORA29-201ENST00000384183 140 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AL357139.1-201ENST00000407792 426 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 RN7SKP284-201ENST00000411002 343 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC009161.1-201ENST00000417306 376 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 EIF1P1-201ENST00000421436 341 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC245102.2-201ENST00000448956 180 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 HMGB3P17-201ENST00000504195 649 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC005741.1-201ENST00000511094 432 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 RNA5SP490-201ENST00000517141 136 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 MRPS36P4-201ENST00000534436 298 ntBASIC2.2□□□□□ -2.06
CPSF2Q9P2I0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms