Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC234772.3-201ENST00000602277 528 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC88CQ9P219 U4.7-201ENST00000638126 106 ntBASIC0.8□□□□□ -2.28
CCDC88CQ9P219 RNU6-500P-201ENST00000362349 107 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 SNORD56.1-201ENST00000362913 68 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-1019P-201ENST00000364424 107 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-1141P-201ENST00000364520 107 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-116P-201ENST00000384042 109 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-843P-201ENST00000384454 104 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 MT-TH-201ENST00000387441 69 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC244670.1-201ENST00000436879 112 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AL135790.2-201ENST00000437701 267 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC007969.2-201ENST00000441891 191 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 KATNBL1P3-201ENST00000443475 909 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC079781.2-201ENST00000446424 169 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 SNORD11.1-201ENST00000459482 85 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 MTCYBP33-201ENST00000575007 1130 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 MIR548AC-201ENST00000585049 88 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-862P-201ENST00000362804 105 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-527P-201ENST00000363425 104 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-39P-201ENST00000384344 107 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-1179P-201ENST00000384667 107 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 Y_RNA.576-201ENST00000384781 102 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RPL21P111-201ENST00000418453 477 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC132479.1-201ENST00000449160 144 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC013470.1-201ENST00000453438 462 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC112204.1-201ENST00000502591 103 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 SNORA43.2-201ENST00000516652 128 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 RNU6-902P-201ENST00000517212 91 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 ZNF519P3-201ENST00000557158 1032 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 MIR3682-201ENST00000581338 84 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC008521.1-201ENST00000587471 187 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC005786.1-201ENST00000588553 154 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.79□□□□□ -2.28
CCDC88CQ9P219 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.79□□□□□ -2.28
CCDC88CQ9P219 AC100821.1-201ENST00000523153 2479 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AC106754.1-201ENST00000562632 1513 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU6-743P-201ENST00000364151 106 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU6-660P-201ENST00000364566 109 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU6-809P-201ENST00000384461 107 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 MIR598-201ENST00000384868 97 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 SNORA26.3-201ENST00000391119 136 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU2-36P-201ENST00000410361 191 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CCDC88CQ9P219 ART2BP-201ENST00000453501 499 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 snoU13.9-201ENST00000458927 103 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AC087477.1-201ENST00000465747 340 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AC104136.1-201ENST00000512969 394 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 MTCO3P28-201ENST00000513351 515 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU6-1129P-201ENST00000515964 104 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU1-86P-201ENST00000516108 154 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU6-415P-201ENST00000516252 97 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 RNU1-107P-201ENST00000516617 154 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AC005668.1-201ENST00000571142 476 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 MIR3169-201ENST00000578032 83 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AC078795.2-201ENST00000602835 1252 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 AP001485.1-201ENST00000604799 199 ntBASIC0.78□□□□□ -2.28
CCDC88CQ9P219 Y_RNA.112-201ENST00000363250 102 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 SNORD113-6-201ENST00000363345 75 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RNU6-517P-201ENST00000384362 110 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RNU6-939P-201ENST00000384634 107 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MIR578-201ENST00000384828 96 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MIR520E-201ENST00000384867 87 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AL049545.1-201ENST00000401856 572 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 Y_RNA.608-201ENST00000410647 95 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 SNAP23P1-201ENST00000433229 246 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MTCO3P7-201ENST00000510008 774 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 MIR449C-201ENST00000516047 92 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 RAB11AP2-201ENST00000545905 639 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC025678.1-201ENST00000567861 338 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC090616.2-202ENST00000584248 222 ntBASIC0.77□□□□□ -2.29
CCDC88CQ9P219 AC012507.3-201ENST00000603556 477 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms