Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 snoU2_19.1-201ENST00000362361 80 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 Y_RNA.329-201ENST00000365209 107 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 RNU6-125P-201ENST00000384505 107 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 U3.40-201ENST00000408706 208 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 OOSP1P1-201ENST00000423265 274 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 TOMM22P2-201ENST00000430735 237 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 RNU2-44P-201ENST00000516795 194 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 MIR3910-1-201ENST00000580936 111 ntBASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.15□□□□□ -1.75
CXXC1Q9P0U4 AC007256.1-201ENST00000392253 2765 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 AC006504.1-201ENST00000562493 3666 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 SNORD87-201ENST00000364849 89 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 RN7SKP51-201ENST00000410781 304 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 AL365496.1-201ENST00000426885 215 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 AC083863.1-201ENST00000438811 231 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 RPS29P26-201ENST00000477483 171 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 MIR4308-201ENST00000580634 81 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 MIR8058-201ENST00000615737 89 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 MIR8057-201ENST00000620957 69 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 MIR7702-201ENST00000621931 59 ntBASIC4.14□□□□□ -1.75
CXXC1Q9P0U4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 RNU1-75P-201ENST00000347264 129 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 RNA5SP50-201ENST00000363731 107 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 RNA5SP354-201ENST00000391247 136 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 AL357139.1-201ENST00000407792 426 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 RNA5SP120-201ENST00000410900 112 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 AC004866.1-201ENST00000411748 78 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 HMGN2P7-201ENST00000456186 273 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 RPL17P51-201ENST00000605218 238 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 AC021753.1-201ENST00000635724 168 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 AL359854.1-201ENST00000614203 1594 ntBASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CXXC1Q9P0U4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 SNORA38.1-201ENST00000364172 131 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 AC097463.2-201ENST00000421074 142 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 HMGN2P20-201ENST00000437531 273 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 Z75741.1-201ENST00000446793 314 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 VWA8P1-201ENST00000510889 176 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 RNU6-436P-201ENST00000516171 114 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 DEFB131C-201ENST00000528817 165 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 MRPS18CP4-201ENST00000535821 231 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 AC069240.1-201ENST00000548774 375 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 uc_338.32-201ENST00000615087 172 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 AC027290.2-201ENST00000623210 18662 ntBASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.12□□□□□ -1.75
CXXC1Q9P0U4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 RNU1-15P-201ENST00000353977 144 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 Y_RNA.170-201ENST00000363746 110 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 RNU6-454P-201ENST00000364292 107 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 MIR199A2-201ENST00000385289 110 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 Z98742.2-201ENST00000431564 187 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 RNU6-1219P-201ENST00000516143 112 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 YPEL5P2-201ENST00000605553 359 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 AL008718.3-201ENST00000610217 321 ntBASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.11□□□□□ -1.75
CXXC1Q9P0U4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms