Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MTCYBP1-201ENST00000454315 1119 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 RPS23P5-201ENST00000495419 428 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AC016632.1-201ENST00000503994 196 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AK3P2-201ENST00000507976 429 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 RNU6-410P-201ENST00000517006 107 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AC103996.1-201ENST00000555468 102 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 Z98751.3-201ENST00000604447 521 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.99□□□□□ -2.25
VAPAQ9P0L0 AL365434.2-201ENST00000607979 234 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.99□□□□□ -2.25
VAPAQ9P0L0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VAPAQ9P0L0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 RPS29P13-201ENST00000402041 169 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 Y_RNA.598-201ENST00000410480 95 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 CST2P1-201ENST00000425770 87 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 RPS6P15-201ENST00000431996 751 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC007547.1-201ENST00000462177 490 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC091435.1-201ENST00000505442 584 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC091874.1-201ENST00000511402 339 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AL512310.8-201ENST00000550183 120 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 CYP4A27P-201ENST00000567218 190 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 VN1R107P-201ENST00000601784 209 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 HSPE1P19-201ENST00000603327 295 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AL356157.2-201ENST00000605122 111 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC008250.2-201ENST00000615261 205 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC126177.8-201ENST00000618339 1015 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 AC099654.5-201ENST00000636479 350 ntBASIC0.98□□□□□ -2.25
VAPAQ9P0L0 RNU1-76P-201ENST00000362903 159 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 RNY4P34-201ENST00000364779 95 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 RNU6-827P-201ENST00000365553 106 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 RNU6-418P-201ENST00000384035 107 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 SNORA36A-201ENST00000384221 132 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 MIR194-1-201ENST00000384892 85 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 MIR208B-201ENST00000401172 77 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AL117342.1-201ENST00000404861 406 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 COX6CP10-201ENST00000416832 224 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AL117339.3-201ENST00000418733 162 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 RPL23AP95-201ENST00000426806 265 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AC002486.1-201ENST00000435098 391 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AC069257.2-201ENST00000441819 155 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 RPS26P45-201ENST00000471748 340 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 MTND3P3-201ENST00000505004 126 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.97□□□□□ -2.25
VAPAQ9P0L0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VAPAQ9P0L0 MZT1P2-201ENST00000604387 248 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AC008945.2-201ENST00000606056 604 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AC008147.4-201ENST00000617570 1204 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 AL450472.1-202ENST00000637286 180 ntBASIC0.97□□□□□ -2.25
VAPAQ9P0L0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
VAPAQ9P0L0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 RNU6-545P-201ENST00000362681 104 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 AC004965.1-201ENST00000413033 213 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 USP9YP28-201ENST00000435142 589 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 PRPS1P1-201ENST00000445305 876 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 RNA5SP384-201ENST00000516615 116 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 RNU6-567P-201ENST00000516746 107 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 RN7SKP88-201ENST00000516847 250 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 RNA5SP404-201ENST00000517118 132 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 CENPUP1-201ENST00000526649 1202 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.96□□□□□ -2.26
VAPAQ9P0L0 MIR4775-201ENST00000581168 75 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 CTHRC1P1-201ENST00000605383 469 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 AC004492.1-201ENST00000607036 742 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 7SK.8-201ENST00000612110 250 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 7SK.11-201ENST00000615477 250 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 AL157834.3-201ENST00000615543 103 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 7SK.13-201ENST00000622040 250 ntBASIC0.96□□□□□ -2.26
VAPAQ9P0L0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RNU6-1214P-201ENST00000363650 109 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 SNORA4.2-201ENST00000365313 147 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RNU6-393P-201ENST00000384475 107 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 MIR454-201ENST00000390180 115 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 RNU6-195P-201ENST00000411352 109 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC060773.1-201ENST00000421698 310 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AC108667.1-201ENST00000428618 249 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 AL596276.1-201ENST00000434465 418 ntBASIC0.95□□□□□ -2.26
VAPAQ9P0L0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms